myRT

myRT report for GCA_005394005.1_ASM539400v1

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Seq: BGDP01000078.1 (149087 bp)
Overview 1 RT 1: 27941-31702 bp Neighborhood of RT #1 [27941, 31707] AlpA RVT-GII cobU cobS Feature: gene Location: 27941-28219 bp Feature: domain Description: AlpA Location: 28037-28214 bp Feature: domain Description: AlpA Location: 28037-2821 4 bp Feature: gene Location: 28254-28556 bp Feature: gene Location: 28910-30172 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 29153-29885 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 291 53-29885 bp Feature: gene Location: 30422-30967 bp Feature: domain Description: cobU Location: 30425-30965 bp Feature: domain Description: cobU Location: 30425-30965 bp Feature: gene Location: 30964-31707 bp Feature: domain Description: cobS Location: 30967-31702 bp Feature: domain Description: cobS Location: 30967-31 702 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: BGDP01000109.1 (6403 bp)
Overview 1 RT 1: 2138-6400 bp Neighborhood of RT #1 [2138, 6400] RVT_N RVT-GII RVT-GII GIIM HNHc DUF1281 DUF1281_C Feature: gene Location: 2138-2407 bp Feature: gene Location: 2888-3028 bp Feature: gene Location: 3050-3784 bp Feature: domain Description: RVT_N Location: 3107-3344 bp Feature: domain Description: RVT_N Location: 3107-3344 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3395-3761 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3395-3761 bp Feature: gene Location: 3852-4775 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3864-4044 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3864-4044 bp Feature: domain Description: GIIM Note: maturase Location: 4098-4329 bp Feature: domain Description: GIIM Note: maturase Location: 4098-432 9 bp Feature: domain Description: HNHc Note: nucleases Location: 4560-4719 bp Feature: domain Description: HNHc Note: nucleases Location: 4560-4719 bp Feature: gene Location: 4852-5754 bp Feature: domain Description: DUF1281 Location: 4921-5449 bp Feature: domain Description: DUF12 81 Location: 492 1-5449 bp Feature: domain Description: DUF1281_C Location: 5455-5695 bp Feature: domain Description: DUF12 81_C Location: 5455-5695 bp Feature: gene Location: 5906-6400 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: BGDP01000117.1 (14680 bp)
Overview 1 RT 1: 7890-10712 bp Neighborhood of RT #1 [7890, 10712] PHA02517 RVT-GII YkfC Feature: gene Location: 7890-8309 bp Feature: domain Description: PHA02517 Location: 7893-8298 bp Feature: domain Description: PHA02517 Location: 7893 -8298 bp Feature: gene Location: 8479-8610 bp Feature: gene Location: 8790-9602 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8883-9462 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8883 -9462 bp Feature: gene Location: 9463-10479 bp Feature: domain Description: YkfC Location: 10159-10429 bp Feature: domain Description: YkfC Location: 10159-10429 bp Feature: gene Location: 10536-10712 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT