myRT

myRT report for GCA_005394965.1_ASM539496v1

Download annotations/find similar RTs

Seq: BGER01000001.1 (251550 bp)
Overview 1 RT 1: 246961-251547 bp Neighborhood of RT #1 [246961, 251549] mutS1 INT_Rci_Hp1_C INT_P4_C RVT-UG3 Feature: gene Location: 246961-249543 bp Feature: domain Description: mutS1 Location: 247012-249532 bp Feature: domain Description: mutS1 Location: 24701 2-249532 bp Feature: gene Location: 249688-251148 bp Feature: domain Description: INT_Rci_Hp1_C Location: 250063-250270 bp Feature: domain Description: INT_Rci_Hp1 _C Location: 250063-250270 bp Feature: domain Description: INT_P4_C Location: 250489-251026 bp Feature: domain Description: INT_P4_C Location: 250489-251 026 bp Feature: gene Location: 251145-251549 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 251427-251547 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 251 427-251 547 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT mutS1 (TIGR01070), INT_Rci_Hp1_C (cd00796), INT_P4_C (cd00801), RVT-UG3

Seq: BGER01000192.1 (15104 bp)
Overview 1 RT 1: 6807-10103 bp Neighborhood of RT #1 [6807, 10117] CdiI_3 RVT-GII RVT-GII GIIM ArgR Feature: gene Location: 6807-7193 bp Feature: domain Description: CdiI_3 Location: 6831-7107 bp Feature: domain Description: CdiI_3 Location: 6831-7107 bp Feature: gene Location: 7339-7533 bp Feature: gene Location: 7641-8123 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7962-8049 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7962 -8049 bp Feature: gene Location: 8162-8932 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8165-8579 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8165-8579 bp Feature: domain Description: GIIM Note: maturase Location: 8630-8795 bp Feature: domain Description: GIIM Note: maturase Location: 8630-8795 bp Feature: gene Location: 9182-9400 bp Feature: gene Location: 9638-10117 bp Feature: domain Description: ArgR Location: 9671-10103 bp Feature: domain Description: ArgR Location: 9671-10103 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT CdiI_3 (pfam18616), RVT-GII, GIIM (pfam08388), ArgR (COG1438)

Seq: BGER01000184.1 (54131 bp)
Overview 1 RT 1: 4294-7858 bp Neighborhood of RT #1 [4294, 7923] PHA02517 RVT-GII GIIM PHA02517 Feature: gene Location: 4294-4677 bp Feature: gene Location: 4760-5233 bp Feature: domain Description: PHA02517 Location: 4766-5222 bp Feature: domain Description: PHA02517 Location: 4766-5222 bp Feature: gene Location: 5329-6852 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5602-6334 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5602-63 3 4 bp Feature: domain Description: GIIM Note: maturase Location: 6409-6607 bp Feature: domain Description: GIIM Note: maturase Location: 6409-6607 bp Feature: gene Location: 6806-7231 bp Feature: gene Location: 7444-7923 bp Feature: domain Description: PHA02517 Location: 7504-7858 bp Feature: domain Description: PHA02517 Location: 7504-7858 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)