myRT

myRT report for GCA_005395385.1_ASM539538v1

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Seq: BGFM01000127.1 (24341 bp)
Overview 1 RT 1: 1071-3607 bp Neighborhood of RT #1 [1071, 3607] RVT_N RVT-GII RVT-GII GIIM HNHc Feature: gene Location: 1071-1271 bp Feature: gene Location: 1385-1519 bp Feature: gene Location: 1544-1960 bp Feature: domain Description: RVT_N Location: 1598-1841 bp Feature: domain Description: RVT_N Location: 1 598-1 841 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1886-1955 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 886-1 955 bp Feature: gene Location: 1976-2143 bp Feature: gene Location: 2171-3139 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2177-2417 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21 77-241 7 bp Feature: domain Description: GIIM Note: maturase Location: 2468-2702 bp Feature: domain Description: GIIM Note: maturase Location: 2468-2702 bp Feature: domain Description: HNHc Note: nucleases Location: 2933-3083 bp Feature: domain Description: HNHc Note: nucleases Location: 2933-3083 bp Feature: gene Location: 3222-3428 bp Feature: gene Location: 3455-3607 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507)

Seq: BGFM01000085.1 (19445 bp)
Overview 1 RT 1: 349-6410 bp Neighborhood of RT #1 [349, 6430] RVT-UG5 PRK04247 RMtype1_S_SonII-TRD2-CR2_like RMtype1_S_SonII-TRD2-CR2_like Feature: gene Location: 349-3366 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 847-1336 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 847-1336 bp Feature: gene Location: 3544-4644 bp Feature: domain Description: PRK04247 Location: 3607-3838 bp Feature: domain Description: PRK042 47 Location: 3607-3838 bp Feature: gene Location: 4655-6430 bp Feature: domain Description: RMtype1_S_SonII-TRD2-CR2_like Location: 5246-5534 bp Feature: domain Description: RMtype1_S_SonII-TRD2 -CR2 _like Location: 52 46-5534 bp Feature: domain Description: RMtype1_S_SonII-TRD2-CR2_like Location: 5837-6410 bp Feature: domain Description: RMtype1_S_SonII-TRD2 -CR2 _like Location: 5837-6410 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG5, PRK04247 (endonuclease NucS), RMtype1_S_SonII-TRD2-CR2_like (cd17246)