myRT

myRT report for GCA_005396045.1_ASM539604v1

Download annotations/find similar RTs

Seq: BGGT01000013.1 (14158 bp)
Overview 1 RT 1: 4299-8605 bp Neighborhood of RT #1 [4299, 8605] DUF905 PRK13732 RVT-GII Intron_maturas2 HNHc Feature: gene Location: 4299-4532 bp Feature: domain Description: DUF905 Location: 4329-4527 bp Feature: domain Description: DUF905 Location: 4329-4527 bp Feature: gene Location: 4595-5203 bp Feature: domain Description: PRK13732 Location: 4703-5201 bp Feature: domain Description: PRK1 3732 Location: 4703-5201 bp Feature: gene Location: 5243-7144 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5510-6341 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 551 0-6341 bp Feature: domain Description: Intron_maturas2 Location: 6455-6713 bp Feature: domain Description: Intron_maturas2 Location: 6455-671 3 bp Feature: domain Description: HNHc Note: nucleases Location: 6887-7049 bp Feature: domain Description: HNHc Note: nucleases Location: 6887-7049 bp Feature: gene Location: 7886-8089 bp Feature: gene Location: 8141-8605 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF905 (pfam06006), PRK13732 (single-stranded DNA-binding protein; Provisional), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: BGGT01000046.1 (72374 bp)
Overview 1 RT 1: 126-4806 bp Neighborhood of RT #1 [126, 4811] RVT-AbiP2 RVT-Retrons Q Feature: gene Location: 126-1304 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 543-996 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 543-996 bp Feature: gene Location: 1499-1645 bp Feature: gene Location: 1647-1787 bp Feature: gene Location: 1855-3045 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2005-2587 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2 005-2 587 bp Feature: gene Location: 3042-3749 bp Feature: gene Location: 3792-4811 bp Feature: domain Description: Q Location: 3795-4806 bp Feature: domain Description: Q Location: 3795-4806 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-AbiP2, RVT-Retrons, Q (PHA02536)

Seq: BGGT01000009.1 (7575 bp)
Overview 1 RT 1: 128-5183 bp Neighborhood of RT #1 [128, 5188] RVT-UG4 AfaD-like PRK15223 Feature: gene Location: 128-352 bp Feature: gene Location: 588-1103 bp Feature: gene Location: 1225-1944 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 1558-1939 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 1558-193 9 bp Feature: gene Location: 2106-2558 bp Feature: domain Description: AfaD-like Location: 2193-2538 bp Feature: domain Description: AfaD-like Location: 2193 -253 8 bp Feature: gene Location: 2573-5188 bp Feature: domain Description: PRK15223 Location: 2651-5183 bp Feature: domain Description: PRK15223 Location: 2651-5183 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG4, AfaD-like (cd18776), PRK15223 (fimbrial biogenesis outer membrane usher protein)

Seq: BGGT01000039.1 (13162 bp)
Overview 1 RT 1: 108-3676 bp Neighborhood of RT #1 [108, 3676] RVT-UG7 PRK09692 Feature: gene Location: 108-446 bp Feature: gene Location: 443-2071 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 851-1280 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 851-1280 bp Feature: gene Location: 2064-3248 bp Feature: domain Description: PRK09692 Location: 2070-3225 bp Feature: domain Description: PRK09692 Location: 2070-3225 bp Feature: gene Location: 3524-3676 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG7, PRK09692 (Integrase; provisional)