myRT

myRT report for GCA_005400305.1_ASM540030v1

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Seq: BIDW01000007.1 (64416 bp)
Overview 1 RT 1: 59691-64415 bp Neighborhood of RT #1 [59691, 64415] proA PRK09692 RVT-UG7 Feature: gene Location: 59691-60944 bp Feature: domain Description: proA Location: 59718-60909 bp Feature: domain Description: proA Location: 5971 8-60909 bp Feature: gene Location: 61299-62483 bp Feature: domain Description: PRK09692 Location: 61305-62460 bp Feature: domain Description: PRK09692 Location: 61 305-62460 bp Feature: gene Location: 62476-64104 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 62884-63313 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 62884-6331 3 bp Feature: gene Location: 64257-64415 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT proA (TIGR00407), PRK09692 (Integrase; provisional), RVT-UG7

Seq: BIDW01000066.1 (11654 bp)
Overview 1 RT 1: 6185-10525 bp Neighborhood of RT #1 [6185, 10530] RVT-GII Intron_maturas2 HNHc PRK13732 PRK13704 Feature: gene Location: 6185-6391 bp Feature: gene Location: 6725-6934 bp Feature: gene Location: 7069-8970 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7336-8167 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7336-8167 bp Feature: domain Description: Intron_maturas2 Location: 8281-8539 bp Feature: domain Description: Intron_maturas2 Location: 82 81-8539 bp Feature: domain Description: HNHc Note: nucleases Location: 8713-8875 bp Feature: domain Description: HNHc Note: nucleases Location: 8713-8875 bp Feature: gene Location: 9010-9618 bp Feature: domain Description: PRK13732 Location: 9118-9616 bp Feature: domain Description: PRK13732 Location: 9118-9616 bp Feature: gene Location: 9811-10530 bp Feature: domain Description: PRK13704 Location: 9814-10525 bp Feature: domain Description: PRK13704 Location: 9814-1052 5 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), PRK13732 (single-stranded DNA-binding protein; Provisional), PRK13704 (plasmid SOS inhibition protein A; Provisional)

Seq: BIDW01000049.1 (7684 bp)
Overview 1 RT 1: 2443-7503 bp Neighborhood of RT #1 [2443, 7503] PRK15223 AfaD-like RVT-UG4 Feature: gene Location: 2443-5058 bp Feature: domain Description: PRK15223 Location: 2521-5053 bp Feature: domain Description: PRK15223 Location: 2521-5053 bp Feature: gene Location: 5073-5525 bp Feature: domain Description: AfaD-like Location: 5160-5505 bp Feature: domain Description: AfaD-like Location: 5160-5505 bp Feature: gene Location: 5687-6406 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 6020-6401 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 6020-6401 bp Feature: gene Location: 6528-7043 bp Feature: gene Location: 7279-7503 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK15223 (fimbrial biogenesis outer membrane usher protein), AfaD-like (cd18776), RVT-UG4