myRT

myRT report for GCA_005403805.1_ASM540380v1

Download annotations/find similar RTs

Seq: BJCW01000027.1 (51011 bp)
Overview 1 RT 1: 24914-27582 bp Neighborhood of RT #1 [24914, 27582] StbD RelE RVT-GII GIIM Feature: gene Location: 24914-25165 bp Feature: domain Description: StbD Location: 24926-25106 bp Feature: domain Description: StbD Location: 24926-251 06 bp Feature: gene Location: 25162-25449 bp Feature: domain Description: RelE Location: 25165-25423 bp Feature: domain Description: RelE Location: 251 65-25423 bp Feature: gene Location: 26191-26535 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 26221-26512 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 26221 -2651 2 bp Feature: gene Location: 26794-27120 bp Feature: domain Description: GIIM Note: maturase Location: 26818-27025 bp Feature: domain Description: GIIM Note: maturase Location: 2681 8-27025 bp Feature: gene Location: 27325-27582 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT StbD (COG2161), RelE (pfam06296), RVT-GII, GIIM (pfam08388)

Seq: BJCW01000028.1 (49006 bp)
Overview 1 RT 1: 496-3181 bp Neighborhood of RT #1 [496, 3181] InsE PHA02517 RVT-GII Feature: gene Location: 496-798 bp Feature: domain Description: InsE Location: 505-787 bp Feature: domain Description: InsE Location: 505-787 bp Feature: gene Location: 825-1652 bp Feature: domain Description: PHA02517 Location: 849-1641 bp Feature: domain Description: PHA02 517 Location: 849-1641 bp Feature: gene Location: 1718-2455 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1724-2225 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 172 4-2 2 2 5 bp Feature: gene Location: 2141-2722 bp Feature: gene Location: 2756-3181 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII

Seq: BJCW01000013.1 (114622 bp)
Overview 1 RT 1: 128-3577 bp Neighborhood of RT #1 [128, 3577] RVT-UG15 PRK09692 Feature: gene Location: 128-304 bp Feature: gene Location: 399-2009 bp Feature: RT Description: RVT-UG15 Note: UG15 RT Location: 807-1230 bp Feature: RT Description: RVT-UG15 Note: UG15 RT Location: 807-123 0 bp Feature: gene Location: 2027-3196 bp Feature: domain Description: PRK09692 Location: 2036-3179 bp Feature: domain Description: PRK09692 Location: 203 6-3 179 bp Feature: gene Location: 3260-3577 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG15, PRK09692 (Integrase; provisional)