myRT

myRT report for GCA_005403925.1_ASM540392v1

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Seq: BJCX01000018.1 (78812 bp)
Overview 1 RT 1: 23666-25361 bp Neighborhood of RT #1 [23666, 25361] group_II_RT_mat RVT-GII GIIM Feature: gene Location: 23666-23887 bp Feature: gene Location: 23928-24242 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 23970-24177 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 23970-241 77 bp Feature: gene Location: 24351-24485 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 24360-24471 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 24360-24471 bp Feature: gene Location: 24677-25069 bp Feature: domain Description: GIIM Note: maturase Location: 24788-24977 bp Feature: domain Description: GIIM Note: maturase Location: 24788-24977 bp Feature: gene Location: 25194-25361 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT group_II_RT_mat (TIGR04416), RVT-GII, GIIM (pfam08388)

Seq: BJCX01000016.1 (92423 bp)
Overview 1 RT 1: 73554-79633 bp Neighborhood of RT #1 [73554, 79650] YjeJ DUF4156 RVT_N RVT-GII GIIM HNHc groEL Feature: gene Location: 73554-74423 bp Feature: domain Description: YjeJ Location: 73557-74403 bp Feature: domain Description: YjeJ Location: 73557-74403 bp Feature: gene Location: 74628-74981 bp Feature: domain Description: DUF4156 Location: 74697-74973 bp Feature: domain Description: DUF4156 Location: 74697-74973 bp Feature: gene Location: 75240-76907 bp Feature: domain Description: RVT_N Location: 75303-75537 bp Feature: domain Description: RVT_N Location: 75303-75537 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 75591-76236 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 75591-762 36 bp Feature: domain Description: GIIM Note: maturase Location: 76290-76521 bp Feature: domain Description: GIIM Note: maturase Location: 762 90-7652 1 bp Feature: domain Description: HNHc Note: nucleases Location: 76731-76893 bp Feature: domain Description: HNHc Note: nucleases Location: 76731-76893 bp Feature: gene Location: 77337-77621 bp Feature: gene Location: 78004-79650 bp Feature: domain Description: groEL Location: 78010-79633 bp Feature: domain Description: groEL Location: 78010-79633 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YjeJ (pfam15922), DUF4156 (pfam13698), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), groEL (PRK12852)

Seq: BJCX01000065.1 (19098 bp)
Overview 1 RT 1: 11994-15113 bp Neighborhood of RT #1 [11994, 15115] PRK10954 RVT-UG4 PRK09413 Feature: gene Location: 11994-12485 bp Feature: domain Description: PRK10954 Location: 12060-12435 bp Feature: domain Description: PRK10954 Location: 12060-1243 5 bp Feature: gene Location: 12649-12801 bp Feature: gene Location: 12875-13972 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 13232-13676 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 13 23 2-13 676 bp Feature: gene Location: 13896-14738 bp Feature: gene Location: 14747-15115 bp Feature: domain Description: PRK09413 Location: 14762-15113 bp Feature: domain Description: PRK09413 Location: 14762-15113 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10954 (thiol:disulfide interchange protein DsbA), RVT-UG4, PRK09413 (IS2 repressor TnpA; Reviewed)

Seq: BJCX01000070.1 (16593 bp)
Overview 1 RT 1: 13178-16592 bp Neighborhood of RT #1 [13178, 16592] RhsA YhhI YhhI RVT-GII GIIM YhhI Feature: gene Location: 13178-13360 bp Feature: domain Description: RhsA Location: 13181-13346 bp Feature: domain Description: RhsA Location: 13181-1334 6 bp Feature: gene Location: 13371-14120 bp Feature: domain Description: YhhI Location: 13437-13761 bp Feature: domain Description: YhhI Location: 134 37-13761 bp Feature: domain Description: YhhI Location: 13782-14022 bp Feature: domain Description: YhhI Location: 13782-14 022 bp Feature: gene Location: 14131-15486 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14413-15097 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14 4 13-15097 bp Feature: domain Description: GIIM Note: maturase Location: 15178-15400 bp Feature: domain Description: GIIM Note: maturase Location: 15178-154 00 bp Feature: gene Location: 15944-16429 bp Feature: domain Description: YhhI Location: 15947-16310 bp Feature: domain Description: YhhI Location: 1594 7-16310 bp Feature: gene Location: 16431-16592 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RhsA (COG3209), YhhI (COG5433), RVT-GII, GIIM (pfam08388)