myRT

myRT report for GCA_005404405.1_ASM540440v1

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Seq: BJDB01000007.1 (161521 bp)
Overview 1 RT 1: 130305-135651 bp Neighborhood of RT #1 [130305, 135668] DUF4156 DUF2188 RVT_N RVT-GII GIIM HNHc groEL Feature: gene Location: 130305-130658 bp Feature: domain Description: DUF4156 Location: 130374-130650 bp Feature: domain Description: DUF41 56 Location: 1 30374-1 30650 bp Feature: gene Location: 130926-131150 bp Feature: domain Description: DUF2188 Location: 130944-131121 bp Feature: domain Description: DUF21 88 Location: 1 30944-1 31 1 21 bp Feature: gene Location: 131257-132915 bp Feature: domain Description: RVT_N Location: 131308-131551 bp Feature: domain Description: RVT_N Location: 1 31 308-1 31 551 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 131596-132241 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 31 596-1 32241 bp Feature: domain Description: GIIM Note: maturase Location: 132292-132526 bp Feature: domain Description: GIIM Note: maturase Location: 1 32292-1 32526 bp Feature: domain Description: HNHc Note: nucleases Location: 132739-132898 bp Feature: domain Description: HNHc Note: nucleases Location: 1 32739-1 32898 bp Feature: gene Location: 133095-133310 bp Feature: gene Location: 134022-135668 bp Feature: domain Description: groEL Location: 134028-135651 bp Feature: domain Description: groEL Location: 1 34028-1 35651 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF4156 (pfam13698), DUF2188 (pfam09954), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), groEL (PRK12852)

Seq: BJDB01000037.1 (40959 bp)
Overview 1 RT 1: 37459-40958 bp Neighborhood of RT #1 [37459, 40958] PRK09692 RVT-UG15 Feature: gene Location: 37459-37719 bp Feature: gene Location: 37783-38952 bp Feature: domain Description: PRK09692 Location: 37792-38935 bp Feature: domain Description: PRK09692 Location: 37792 -38935 bp Feature: gene Location: 38970-40580 bp Feature: RT Description: RVT-UG15 Note: UG15 RT Location: 39378-39801 bp Feature: RT Description: RVT-UG15 Note: UG15 RT Location: 39378-39801 bp Feature: gene Location: 40800-40958 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09692 (Integrase; provisional), RVT-UG15