myRT

myRT report for GCA_005405485.1_ASM540548v1

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Seq: BJED01000023.1 (56237 bp)
Overview 1 RT 1: 6333-11139 bp Neighborhood of RT #1 [6333, 11139] DUF961 FtsK RVT-GII Intron_maturas2 HNHc Feature: gene Location: 6333-6740 bp Feature: domain Description: DUF961 Location: 6390-6669 bp Feature: domain Description: DUF961 Location: 6390-6669 bp Feature: gene Location: 6775-7989 bp Feature: domain Description: FtsK Location: 7411-7897 bp Feature: domain Description: FtsK Location: 741 1 -7897 bp Feature: gene Location: 8563-10371 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8827-9652 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8827-9652 bp Feature: domain Description: Intron_maturas2 Location: 9727-10114 bp Feature: domain Description: Intron_maturas2 Location: 9727-1 01 1 4 bp Feature: domain Description: HNHc Note: nucleases Location: 10189-10342 bp Feature: domain Description: HNHc Note: nucleases Location: 1 01 89-1 0342 bp Feature: gene Location: 10530-10793 bp Feature: gene Location: 10828-11139 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF961 (pfam06125), FtsK (COG1674), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: BJED01000018.1 (116085 bp)
Overview 1 RT 1: 5496-10070 bp Neighborhood of RT #1 [5496, 10114] Trans_reg_C RVT-GII GIIM ECF_S_folT_fam Feature: gene Location: 5496-6290 bp Feature: domain Description: Trans_reg_C Location: 6006-6225 bp Feature: domain Description: Trans_reg_C Location: 6006-62 2 5 bp Feature: gene Location: 6504-6638 bp Feature: gene Location: 6891-8279 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7212-7827 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 72 12 -782 7 bp Feature: domain Description: GIIM Note: maturase Location: 7884-8103 bp Feature: domain Description: GIIM Note: maturase Location: 7884-8103 bp Feature: gene Location: 8360-9259 bp Feature: gene Location: 9575-10114 bp Feature: domain Description: ECF_S_folT_fam Location: 9599-10070 bp Feature: domain Description: ECF_S_folT_fam Location: 9599-10070 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Trans_reg_C (smart00862), RVT-GII, GIIM (pfam08388), ECF_S_folT_fam (TIGR04518)

Seq: BJED01000015.1 (126767 bp)
Overview 1 RT 1: 114962-121889 bp Neighborhood of RT #1 [114962, 121894] RVT-UG3 RVT-UG8 guaA PRK05439 Feature: gene Location: 114962-115141 bp Feature: gene Location: 115148-115348 bp Feature: gene Location: 115778-116896 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 115985-116414 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 115985-116414 bp Feature: gene Location: 117108-119195 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 117669-118113 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 117669-118113 bp Feature: gene Location: 119347-120915 bp Feature: domain Description: guaA Location: 119380-120913 bp Feature: domain Description: guaA Location: 1193 80-120913 bp Feature: gene Location: 120971-121894 bp Feature: domain Description: PRK05439 Location: 120980-121889 bp Feature: domain Description: PRK0543 9 Location: 120980-121889 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG3, RVT-UG8, guaA (PRK00074), PRK05439 (pantothenate kinase; Provisional)