myRT

myRT report for GCA_005502555.1_ASM550255v1

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Seq: SCOK01000030.1 (71309 bp)
Overview 1 RT 1: 51723-61217 bp Neighborhood of RT #1 [51723, 61222] DUF2835 RVT-GII GIIM Bac_GDH MoxR Feature: gene Location: 51723-51944 bp Feature: domain Description: DUF2835 Location: 51732-51939 bp Feature: domain Description: DUF2835 Location: 51 732-51 939 bp Feature: gene Location: 52092-52964 bp Feature: gene Location: 53137-54504 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 53437-54052 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 53437-54052 bp Feature: domain Description: GIIM Note: maturase Location: 54109-54325 bp Feature: domain Description: GIIM Note: maturase Location: 541 09-54325 bp Feature: gene Location: 55000-59862 bp Feature: domain Description: Bac_GDH Location: 55231-59821 bp Feature: domain Description: Bac_GDH Location: 55231 -59821 bp Feature: gene Location: 60263-61222 bp Feature: domain Description: MoxR Location: 60278-61217 bp Feature: domain Description: MoxR Location: 60278-61 21 7 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: SCOK01000011.1 (129233 bp)
Overview 1 RT 1: 127084-128670 bp Neighborhood of RT #1 [127084, 128891] DDE_Tnp_IS66_C RVT-GII GIIM Feature: gene Location: 127084-127368 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 127228-127342 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 12 72 2 8-12 7342 bp Feature: gene Location: 127577-127798 bp Feature: gene Location: 127818-128891 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 127899-128385 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12 7899-12 8385 bp Feature: domain Description: GIIM Note: maturase Location: 128436-128670 bp Feature: domain Description: GIIM Note: maturase Location: 12 8436-12 8670 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: SCOK01000060.1 (28486 bp)
Overview 1 RT 1: 11581-15381 bp Neighborhood of RT #1 [11581, 15386] COG2159 DDE_Tnp_IS66_C RVT-GII GIIM InsE panC Feature: gene Location: 11581-12600 bp Feature: domain Description: COG2159 Location: 11716-12583 bp Feature: domain Description: COG2159 Location: 11716-12583 bp Feature: gene Location: 12707-12850 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 12713-12824 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 12713 -12824 bp Feature: gene Location: 12972-13856 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13008-13479 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13 008-13 479 bp Feature: domain Description: GIIM Note: maturase Location: 13557-13773 bp Feature: domain Description: GIIM Note: maturase Location: 13 557-13 773 bp Feature: gene Location: 13754-14146 bp Feature: domain Description: InsE Location: 13757-13910 bp Feature: domain Description: InsE Location: 13 757-13 910 bp Feature: gene Location: 14436-15386 bp Feature: domain Description: panC Location: 14553-15381 bp Feature: domain Description: panC Location: 14553 -153 81 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: SCOK01000028.1 (72706 bp)
Overview 1 RT 1: 1-4277 bp Neighborhood of RT #1 [1, 4277] LZ_Tnp_IS66 zf-IS66 DDE_Tnp_IS66 DDE_Tnp_IS66_C TnpB_IS66 RVT-GII GIIM TnpB_IS66 Feature: gene Location: 1-1521 bp Feature: domain Description: LZ_Tnp_IS66 Location: 64-316 bp Feature: domain Description: LZ_Tnp_IS66 Location: 64 -316 bp Feature: domain Description: zf-IS66 Location: 346-469 bp Feature: domain Description: zf-IS66 Location: 34 6-4 69 bp Feature: domain Description: DDE_Tnp_IS66 Location: 514-1369 bp Feature: domain Description: DDE_Tnp_IS66 Location: 514 -1369 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 1390-1504 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 1390-1504 bp Feature: gene Location: 1541-1741 bp Feature: domain Description: TnpB_IS66 Location: 1565-1697 bp Feature: domain Description: TnpB_IS66 Location: 1565-1697 bp Feature: gene Location: 1775-3043 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1979-2636 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1979-2636 bp Feature: domain Description: GIIM Note: maturase Location: 2714-2936 bp Feature: domain Description: GIIM Note: maturase Location: 2714 -2936 bp Feature: gene Location: 3555-3758 bp Feature: domain Description: TnpB_IS66 Location: 3585-3735 bp Feature: domain Description: TnpB_IS66 Location: 3585-3735 bp Feature: gene Location: 3804-4277 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: SCOK01000013.1 (127113 bp)
Overview 1 RT 1: 50081-57576 bp Neighborhood of RT #1 [50081, 57584] lipid_A_lpxH PRK10791 RVT_N RVT-GII GIIM HNH PRK05347 cysS Feature: gene Location: 50081-50803 bp Feature: domain Description: lipid_A_lpxH Location: 50090-50774 bp Feature: domain Description: lipid_A_lpxH Location: 5 0090-5 0774 bp Feature: gene Location: 50800-51294 bp Feature: domain Description: PRK10791 Location: 50803-51289 bp Feature: domain Description: PRK10791 Location: 5 0803-5 1289 bp Feature: gene Location: 51415-53130 bp Feature: domain Description: RVT_N Location: 51469-51712 bp Feature: domain Description: RVT_N Location: 5 1469-5 1712 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 51757-52393 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5 175 7-5 2393 bp Feature: domain Description: GIIM Note: maturase Location: 52456-52690 bp Feature: domain Description: GIIM Note: maturase Location: 5 245 6-5 2690 bp Feature: domain Description: HNH Note: nucleases Location: 52942-53080 bp Feature: domain Description: HNH Note: nucleases Location: 5 2942-5 3080 bp Feature: gene Location: 54532-56199 bp Feature: domain Description: PRK05347 Location: 54547-56194 bp Feature: domain Description: PRK05 347 Location: 5 45 47-5 6194 bp Feature: gene Location: 56199-57584 bp Feature: domain Description: cysS Location: 56202-57576 bp Feature: domain Description: cysS Location: 5 6202-5 75 76 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT