myRT

myRT report for GCA_005503725.1_ASM550372v1

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Seq: SCMN01000001.1 (226280 bp)
Overview 1 RT 1: 160879-166746 bp Neighborhood of RT #1 [160879, 166760] PBP2_Bug_TTT ALDH_F1-2_Ald2-like RVT-GII GIIM FabG BKR_like_SDR_like Feature: gene Location: 160879-161817 bp Feature: domain Description: PBP2_Bug_TTT Location: 160927-161794 bp Feature: domain Description: PBP2_Bug_TTT Location: 1 60927-1 61 794 bp Feature: gene Location: 161919-163388 bp Feature: domain Description: ALDH_F1-2_Ald2-like Location: 161967-163377 bp Feature: domain Description: ALDH_F1 -2_Ald2-like Location: 1 61 967-1 63377 bp Feature: gene Location: 163660-164721 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 163666-164113 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 63666-1 641 1 3 bp Feature: domain Description: GIIM Note: maturase Location: 164173-164383 bp Feature: domain Description: GIIM Note: maturase Location: 1 641 73-1 64383 bp Feature: gene Location: 164961-165800 bp Feature: domain Description: FabG Location: 165009-165783 bp Feature: domain Description: FabG Location: 1 65009-1 65783 bp Feature: gene Location: 166041-166760 bp Feature: domain Description: BKR_like_SDR_like Location: 166044-166746 bp Feature: domain Description: BKR_like_SDR_like Location: 1 66044-1 66746 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PBP2_Bug_TTT (cd07012), ALDH_F1-2_Ald2-like (cd07091), RVT-GII, GIIM (pfam08388), FabG (COG1028), BKR_like_SDR_like (cd05344)

Seq: SCMN01000247.1 (1899 bp)
Overview 1 RT 1: 72-1293 bp Neighborhood of RT #1 [72, 1463] RVT-GII GIIM Feature: gene Location: 72-1463 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 402-1020 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 402 -102 0 bp Feature: domain Description: GIIM Note: maturase Location: 1068-1293 bp Feature: domain Description: GIIM Note: maturase Location: 1068-12 93 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: SCMN01000027.1 (38073 bp)
Overview 1 RT 1: 24148-37543 bp Neighborhood of RT #1 [24148, 37692] met_A_Alw26 met_A_Alw26 RVT-UG1 DUF262 COG3472 HNH_2 Feature: gene Location: 24148-29226 bp Feature: domain Description: met_A_Alw26 Location: 25606-25786 bp Feature: domain Description: met_A_Alw26 Location: 25606-25786 bp Feature: domain Description: met_A_Alw26 Location: 28105-28390 bp Feature: domain Description: met_A_Alw26 Location: 28105-283 90 bp Feature: gene Location: 29236-31224 bp Feature: gene Location: 31357-35208 bp Feature: RT Description: RVT-UG1 Note: UG1 RT Location: 31999-32509 bp Feature: RT Description: RVT-UG1 Note: UG1 RT Location: 3 1999-3 2509 bp Feature: gene Location: 35210-36976 bp Feature: domain Description: DUF262 Location: 35270-35888 bp Feature: domain Description: DUF262 Location: 3 5270-3 5888 bp Feature: domain Description: COG3472 Location: 35927-36959 bp Feature: domain Description: COG3 472 Location: 3 5927-3 6959 bp Feature: gene Location: 37144-37692 bp Feature: domain Description: HNH_2 Location: 37387-37543 bp Feature: domain Description: HNH_2 Location: 3 73 87-3 7543 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT met_A_Alw26 (TIGR02987), RVT-UG1, DUF262 (pfam03235), COG3472 (Uncharacterized protein ), HNH_2 (pfam13391)

Seq: SCMN01000028.1 (37871 bp)
Overview 1 RT 1: 2-2127 bp Neighborhood of RT #1 [2, 2189] RVT-GII GIIM Nudix_Hydrolase_4 Feature: gene Location: 2-1192 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 158-770 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 158-770 bp Feature: domain Description: GIIM Note: maturase Location: 830-1034 bp Feature: domain Description: GIIM Note: maturase Location: 830-1034 bp Feature: gene Location: 1317-1526 bp Feature: gene Location: 1644-2189 bp Feature: domain Description: Nudix_Hydrolase_4 Location: 1740-2127 bp Feature: domain Description: Nudix_Hydrolase_4 Location: 174 0-2127 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), Nudix_Hydrolase_4 (cd04511)

Seq: SCMN01000256.1 (1636 bp)
Overview 1 RT 1: 3-1119 bp Neighborhood of RT #1 [3, 1241] RVT-GII Feature: gene Location: 3-1241 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 429-1119 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 429-1119 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII