myRT

myRT report for GCA_005518205.1_ASM551820v1

Download annotations/find similar RTs

Seq: RFFC01000001.1 Hormoscilla sp. GUM202 Ga0115830_101, whole genome shotgun sequence (237506 bp)
Overview 1 RT 1: 7422-10772 bp 2 RT 2: 26440-29461 bp 3 RT 3: 33502-36806 bp 4 RT 4: 234620-237504 bp Neighborhood of RT #1 [7422, 10772] YejR EAL RVT-Retrons Neighborhood of RT #2 [26440, 29526] COG3864 COG4337 RVT_N RVT-GII GIIM McrA Neighborhood of RT #3 [33502, 36806] RVT_N RVT-GII GIIM McrA PLN02578 Neighborhood of RT #4 [234620, 237504] RVT_N RVT-GII GIIM Feature: gene Location: 7422-8504 bp Feature: domain Description: YejR Location: 7482-8481 bp Feature: domain Description: YejR Location: 7482-8481 bp Feature: gene Location: 8919-9212 bp Feature: domain Description: EAL Location: 8922-9207 bp Feature: domain Description: EAL Location: 8922-9207 bp Feature: gene Location: 9367-9756 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 9409-9679 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 9409-9679 bp Feature: gene Location: 10206-10454 bp Feature: gene Location: 10506-10772 bp Feature: gene Location: 26440-26742 bp Feature: domain Description: COG3864 Location: 26458-26611 bp Feature: domain Description: COG3864 Location: 26458-2661 1 bp Feature: gene Location: 26896-27456 bp Feature: domain Description: COG4337 Location: 26995-27445 bp Feature: domain Description: COG4337 Location: 26995-27445 bp Feature: gene Location: 27751-29526 bp Feature: RT Description: RVT_N Location: 27790-28036 bp Feature: RT Description: RVT_N Location: 27790-28036 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 28084-28735 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 28084-28735 bp Feature: domain Description: GIIM Note: maturase Location: 28822-29056 bp Feature: domain Description: GIIM Note: maturase Location: 28822-29056 bp Feature: domain Description: McrA Location: 29134-29461 bp Feature: domain Description: McrA Location: 291 34-29461 bp Feature: gene Location: 33502-35277 bp Feature: RT Description: RVT_N Location: 33541-33787 bp Feature: RT Description: RVT_N Location: 33541 -33787 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 33835-34486 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 33835-34486 bp Feature: domain Description: GIIM Note: maturase Location: 34573-34807 bp Feature: domain Description: GIIM Note: maturase Location: 34573-34807 bp Feature: domain Description: McrA Location: 34885-35212 bp Feature: domain Description: McrA Location: 34885-3521 2 bp Feature: gene Location: 35629-36543 bp Feature: domain Description: PLN02578 Location: 35689-36520 bp Feature: domain Description: PLN02578 Location: 35689-36520 bp Feature: gene Location: 36663-36806 bp Feature: gene Location: 234620-234994 bp Feature: gene Location: 235230-235487 bp Feature: gene Location: 235701-237287 bp Feature: RT Description: RVT_N Location: 235740-235986 bp Feature: RT Description: RVT_N Location: 235740-235986 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 236034-236685 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 236034-236685 bp Feature: domain Description: GIIM Note: maturase Location: 236787-237018 bp Feature: domain Description: GIIM Note: maturase Location: 236787-23701 8 bp Feature: gene Location: 237373-237504 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YejR (COG0523), EAL (smart00052), RVT-Retrons, COG3864 (Predicted metal-dependent peptidase ), COG4337 (Uncharacterized protein ), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), McrA (COG4058), PLN02578 (hydrolase)

Seq: RFFC01000002.1 Hormoscilla sp. GUM202 Ga0115830_102, whole genome shotgun sequence (278577 bp)
Overview 1 RT 1: 275606-278414 bp Neighborhood of RT #1 [275606, 278575] KOG1552 RVT_N RVT-GII GIIM Feature: gene Location: 275606-276265 bp Feature: domain Description: KOG1552 Location: 275633-276260 bp Feature: domain Description: KOG1552 Location: 2 75633-2 762 60 bp Feature: gene Location: 276523-276735 bp Feature: gene Location: 277139-278575 bp Feature: RT Description: RVT_N Location: 277193-277394 bp Feature: RT Description: RVT_N Location: 2 77193-2 77394 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 277442-278093 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 77442 -2 78093 bp Feature: domain Description: GIIM Note: maturase Location: 278180-278414 bp Feature: domain Description: GIIM Note: maturase Location: 2 78180-2 78414 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT KOG1552 (KOG1552, Predicted alpha/beta hydrolase ), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: RFFC01000003.1 Hormoscilla sp. GUM202 Ga0115830_103, whole genome shotgun sequence (88764 bp)
Overview 1 RT 1: 43378-46760 bp Neighborhood of RT #1 [43378, 46771] AglD2 HNH RVT_N RVT-GII YkfC LPG_synthase_TM Feature: gene Location: 43378-43827 bp Feature: domain Description: AglD2 Location: 43537-43780 bp Feature: domain Description: AglD2 Location: 43 53 7-43 780 bp Feature: gene Location: 43851-44066 bp Feature: domain Description: HNH Note: nucleases Location: 43854-43944 bp Feature: domain Description: HNH Note: nucleases Location: 43 854-43 944 bp Feature: gene Location: 44134-45657 bp Feature: RT Description: RVT_N Location: 44173-44419 bp Feature: RT Description: RVT_N Location: 44173 -44419 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 44470-45115 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 44470-45115 bp Feature: domain Description: YkfC Location: 45337-45559 bp Feature: domain Description: YkfC Location: 453 3 7-45559 bp Feature: gene Location: 45774-45944 bp Feature: gene Location: 46241-46771 bp Feature: domain Description: LPG_synthase_TM Location: 46292-46760 bp Feature: domain Description: LPG_synthase_TM Location: 46292-46760 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AglD2 (COG0392), HNH (pfam01844), RVT_N (pfam13655), RVT-GII, YkfC (COG3344), LPG_synthase_TM (pfam03706)

Seq: RFFC01000004.1 Hormoscilla sp. GUM202 Ga0115830_104, whole genome shotgun sequence (81751 bp)
Overview 1 RT 1: 56568-61987 bp Neighborhood of RT #1 [56568, 62307] TadA RVT_N RVT-GII GIIM HNH PlsC HSDR_N_2 AAA_31 Feature: gene Location: 56568-57209 bp Feature: domain Description: TadA Location: 56601-57030 bp Feature: domain Description: TadA Location: 56601-57030 bp Feature: gene Location: 57502-57774 bp Feature: gene Location: 58109-59881 bp Feature: RT Description: RVT_N Location: 58148-58394 bp Feature: RT Description: RVT_N Location: 5814 8-58394 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 58442-59093 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 584 4 2-59093 bp Feature: domain Description: GIIM Note: maturase Location: 59180-59414 bp Feature: domain Description: GIIM Note: maturase Location: 59180-594 14 bp Feature: domain Description: HNH Note: nucleases Location: 59627-59762 bp Feature: domain Description: HNH Note: nucleases Location: 59627-59762 bp Feature: gene Location: 59900-60412 bp Feature: domain Description: PlsC Location: 59912-60119 bp Feature: domain Description: PlsC Location: 59912-60119 bp Feature: gene Location: 60856-62307 bp Feature: domain Description: HSDR_N_2 Location: 60988-61267 bp Feature: domain Description: HSDR_N_2 Location: 60988-61267 bp Feature: domain Description: AAA_31 Location: 61450-61987 bp Feature: domain Description: AAA_31 Location: 614 50-61987 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TadA (COG0590), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNH (pfam01844), PlsC (smart00563), HSDR_N_2 (pfam13588), AAA_31 (pfam13614)

Seq: RFFC01000005.1 Hormoscilla sp. GUM202 Ga0115830_105, whole genome shotgun sequence (180614 bp)
Overview 1 RT 1: 66261-70295 bp Neighborhood of RT #1 [66261, 70312] CpeT RVT_N RVT-GII RVT-GII GIIM McrA InsQ InsQ Feature: gene Location: 66261-66857 bp Feature: domain Description: CpeT Location: 66288-66819 bp Feature: domain Description: CpeT Location: 66288-66819 bp Feature: gene Location: 67188-67574 bp Feature: gene Location: 67779-68360 bp Feature: RT Description: RVT_N Location: 67818-68064 bp Feature: RT Description: RVT_N Location: 67818-68064 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 68112-68358 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 68112-6835 8 bp Feature: gene Location: 68406-69554 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 68412-68745 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 68412-68745 bp Feature: domain Description: GIIM Note: maturase Location: 68847-69078 bp Feature: domain Description: GIIM Note: maturase Location: 68847-69078 bp Feature: domain Description: McrA Location: 69150-69468 bp Feature: domain Description: McrA Location: 6915 0-69468 bp Feature: gene Location: 69556-69771 bp Feature: gene Location: 69794-70312 bp Feature: domain Description: InsQ Location: 69833-70055 bp Feature: domain Description: InsQ Location: 69833-7005 5 bp Feature: domain Description: InsQ Location: 70166-70295 bp Feature: domain Description: InsQ Location: 70166-70295 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT CpeT (pfam06206), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), McrA (COG4058), InsQ (COG0675)

Seq: RFFC01000006.1 Hormoscilla sp. GUM202 Ga0115830_106, whole genome shotgun sequence (280342 bp)
Overview 1 RT 1: 22859-30534 bp 2 RT 2: 62674-65909 bp 3 RT 3: 170854-173139 bp 4 RT 4: 237602-241990 bp Neighborhood of RT #1 [22859, 30536] VCBS VCBS HemolysinCabind HemolysinCabind HemolysinCabind Uma2 RVT-GII GIIM McrA RVT_N RVT-GII PGM1 Neighborhood of RT #2 [62674, 65909] RVT_N RVT-GII Neighborhood of RT #3 [170854, 173139] RVT_N RVT-GII GIIM McrA Neighborhood of RT #4 [237602, 241998] Dcm RVT_N RVT-GII GIIM McrA Dcm PRK12497 Feature: gene Location: 22859-23977 bp Feature: domain Description: VCBS Location: 22943-23018 bp Feature: domain Description: VCBS Location: 22943-23018 bp Feature: domain Description: VCBS Location: 23171-23360 bp Feature: domain Description: VCBS Location: 23171-2336 0 bp Feature: domain Description: HemolysinCabind Location: 23423-23516 bp Feature: domain Description: HemolysinCabind Location: 23423-23516 bp Feature: domain Description: HemolysinCabind Location: 23573-23678 bp Feature: domain Description: HemolysinCabind Location: 23573-236 78 bp Feature: domain Description: HemolysinCabind Location: 23681-23768 bp Feature: domain Description: HemolysinCabind Location: 236 81-2376 8 bp Feature: gene Location: 24113-24919 bp Feature: domain Description: Uma2 Location: 24161-24668 bp Feature: domain Description: Uma2 Location: 2416 1-246 6 8 bp Feature: gene Location: 25685-27055 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 25688-26267 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 256 88-26 26 7 bp Feature: domain Description: GIIM Note: maturase Location: 26354-26588 bp Feature: domain Description: GIIM Note: maturase Location: 26 354-26 588 bp Feature: domain Description: McrA Location: 26642-26990 bp Feature: domain Description: McrA Location: 26 6 42-26 990 bp Feature: gene Location: 27059-27463 bp Feature: RT Description: RVT_N Location: 27098-27344 bp Feature: RT Description: RVT_N Location: 27098-27344 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 27392-27458 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 27392-27458 bp Feature: gene Location: 27666-28052 bp Feature: gene Location: 28902-30536 bp Feature: domain Description: PGM1 Location: 28917-30534 bp Feature: domain Description: PGM1 Location: 28917-30534 bp Feature: gene Location: 62674-62871 bp Feature: gene Location: 63265-63447 bp Feature: gene Location: 63485-64336 bp Feature: RT Description: RVT_N Location: 63524-63770 bp Feature: RT Description: RVT_N Location: 6 3524-6 3770 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 63818-64316 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6 3818-6 4316 bp Feature: gene Location: 65350-65502 bp Feature: gene Location: 65658-65909 bp Feature: gene Location: 170854-171174 bp Feature: gene Location: 171161-171460 bp Feature: RT Description: RVT_N Location: 171200-171422 bp Feature: RT Description: RVT_N Location: 171200-171422 bp Feature: gene Location: 171471-172142 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 171516-172131 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 171516 -172131 bp Feature: gene Location: 172288-172968 bp Feature: domain Description: GIIM Note: maturase Location: 172297-172492 bp Feature: domain Description: GIIM Note: maturase Location: 172297-172492 bp Feature: domain Description: McrA Location: 172588-172873 bp Feature: domain Description: McrA Location: 172588-172873 bp Feature: gene Location: 172978-173139 bp Feature: gene Location: 237602-237730 bp Feature: domain Description: Dcm Location: 237617-237716 bp Feature: domain Description: Dcm Location: 2376 17-237716 bp Feature: gene Location: 237768-238112 bp Feature: gene Location: 238246-240120 bp Feature: RT Description: RVT_N Location: 238360-238606 bp Feature: RT Description: RVT_N Location: 23836 0-2386 06 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 238654-239305 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2386 54-239305 bp Feature: domain Description: GIIM Note: maturase Location: 239404-239638 bp Feature: domain Description: GIIM Note: maturase Location: 239404-2396 38 bp Feature: domain Description: McrA Location: 239734-240004 bp Feature: domain Description: McrA Location: 239734-240004 bp Feature: gene Location: 240274-241278 bp Feature: domain Description: Dcm Location: 240280-241144 bp Feature: domain Description: Dcm Location: 240280-241144 bp Feature: gene Location: 241531-241998 bp Feature: domain Description: PRK12497 Location: 241546-241990 bp Feature: domain Description: PRK12497 Location: 241546 -241990 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT VCBS (pfam13517), HemolysinCabind (pfam00353), Uma2 (pfam05685), RVT-GII, GIIM (pfam08388), McrA (COG4058), RVT_N (pfam13655), PGM1 (cd03085), Dcm (COG0270), PRK12497 (YraN family protein)

Seq: RFFC01000007.1 Hormoscilla sp. GUM202 Ga0115830_107, whole genome shotgun sequence (103644 bp)
Overview 1 RT 1: 77470-79637 bp Neighborhood of RT #1 [77470, 79642] RVT-GII DLH PRK07400 Feature: gene Location: 77470-78360 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 77566-78217 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7 7 566-7 8217 bp Feature: gene Location: 78485-78712 bp Feature: domain Description: DLH Location: 78491-78698 bp Feature: domain Description: DLH Location: 7 8491-7 8698 bp Feature: gene Location: 78728-79642 bp Feature: domain Description: PRK07400 Location: 78761-79637 bp Feature: domain Description: PRK07 400 Location: 7 87 61-7 9637 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, DLH (pfam01738), PRK07400 (30S ribosomal protein S1; Reviewed)

Seq: RFFC01000008.1 Hormoscilla sp. GUM202 Ga0115830_108, whole genome shotgun sequence (169688 bp)
Overview 1 RT 1: 131650-135553 bp Neighborhood of RT #1 [131650, 135579] AcrB AcrB RVT-GII RVT-GII GIIM McrA Feature: gene Location: 131650-133602 bp Feature: domain Description: AcrB Location: 131677-132493 bp Feature: domain Description: AcrB Location: 131677-132493 bp Feature: domain Description: AcrB Location: 132562-133537 bp Feature: domain Description: AcrB Location: 132562-133537 bp Feature: gene Location: 133829-133993 bp Feature: gene Location: 134396-134662 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 134477-134642 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 134477-134642 bp Feature: gene Location: 134668-135579 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 134671-134845 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 134671-1348 45 bp Feature: domain Description: GIIM Note: maturase Location: 134947-135178 bp Feature: domain Description: GIIM Note: maturase Location: 134947-135178 bp Feature: domain Description: McrA Location: 135274-135553 bp Feature: domain Description: McrA Location: 135274-135553 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AcrB (COG0841), RVT-GII, GIIM (pfam08388), McrA (COG4058)

Seq: RFFC01000009.1 Hormoscilla sp. GUM202 Ga0115830_109, whole genome shotgun sequence (173237 bp)
Overview 1 RT 1: 78596-81654 bp Neighborhood of RT #1 [78596, 81654] TolB PRK12577 RVT_N RVT-GII GIIM HNH Feature: gene Location: 78596-79108 bp Feature: domain Description: TolB Location: 78674-79088 bp Feature: domain Description: TolB Location: 78674-79 088 bp Feature: gene Location: 79233-79376 bp Feature: domain Description: PRK12577 Location: 79236-79371 bp Feature: domain Description: PRK12577 Location: 79 236-79 371 bp Feature: gene Location: 79394-81187 bp Feature: RT Description: RVT_N Location: 79433-79679 bp Feature: RT Description: RVT_N Location: 79 433-79 679 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 79727-80372 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 79 727-80372 bp Feature: domain Description: GIIM Note: maturase Location: 80474-80705 bp Feature: domain Description: GIIM Note: maturase Location: 80474-80705 bp Feature: domain Description: HNH Note: nucleases Location: 80930-81065 bp Feature: domain Description: HNH Note: nucleases Location: 809 30-81065 bp Feature: gene Location: 81181-81405 bp Feature: gene Location: 81448-81654 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TolB (COG0823), PRK12577 (succinate dehydrogenase/fumarate reductase iron-sulfur subunit), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNH (pfam01844)

Seq: RFFC01000012.1 Hormoscilla sp. GUM202 Ga0115830_112, whole genome shotgun sequence (119090 bp)
Overview 1 RT 1: 109704-112990 bp Neighborhood of RT #1 [109704, 112990] RVT_N RVT-GII GIIM McrA Feature: gene Location: 109704-109862 bp Feature: gene Location: 109864-110136 bp Feature: gene Location: 110147-111907 bp Feature: RT Description: RVT_N Location: 110186-110432 bp Feature: RT Description: RVT_N Location: 110 186-110 432 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 110480-111131 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 110 480-111131 bp Feature: domain Description: GIIM Note: maturase Location: 111236-111464 bp Feature: domain Description: GIIM Note: maturase Location: 111236-111464 bp Feature: domain Description: McrA Location: 111560-111878 bp Feature: domain Description: McrA Location: 111560-111878 bp Feature: gene Location: 112309-112524 bp Feature: gene Location: 112544-112990 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), McrA (COG4058)

Seq: RFFC01000014.1 Hormoscilla sp. GUM202 Ga0115830_114, whole genome shotgun sequence (106733 bp)
Overview 1 RT 1: 23806-26863 bp 2 RT 2: 95931-100312 bp Neighborhood of RT #1 [23806, 26863] RVT_N RVT-GII GIIM McrA Neighborhood of RT #2 [95931, 100312] FtsI McrA RVT_N RVT-GII GIIM Feature: gene Location: 23806-25581 bp Feature: RT Description: RVT_N Location: 23845-24091 bp Feature: RT Description: RVT_N Location: 23845-24091 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 24139-24787 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 24139-24787 bp Feature: domain Description: GIIM Note: maturase Location: 24877-25111 bp Feature: domain Description: GIIM Note: maturase Location: 24877-2511 1 bp Feature: domain Description: McrA Location: 25171-25498 bp Feature: domain Description: McrA Location: 25171-25498 bp Feature: gene Location: 25675-26496 bp Feature: gene Location: 26729-26863 bp Feature: gene Location: 95931-97739 bp Feature: domain Description: FtsI Location: 96000-97728 bp Feature: domain Description: FtsI Location: 96000-97728 bp Feature: gene Location: 97919-98362 bp Feature: domain Description: McrA Location: 97955-98249 bp Feature: domain Description: McrA Location: 97955-98249 bp Feature: gene Location: 98442-99512 bp Feature: RT Description: RVT_N Location: 98448-98553 bp Feature: RT Description: RVT_N Location: 98448-98553 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 98601-99252 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 98601-99252 bp Feature: domain Description: GIIM Note: maturase Location: 99339-99504 bp Feature: domain Description: GIIM Note: maturase Location: 99339-99504 bp Feature: gene Location: 99997-100155 bp Feature: gene Location: 100133-100312 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), McrA (COG4058), FtsI (COG0768)

Seq: RFFC01000015.1 Hormoscilla sp. GUM202 Ga0115830_115, whole genome shotgun sequence (251670 bp)
Overview 1 RT 1: 82782-87797 bp 2 RT 2: 230504-234221 bp Neighborhood of RT #1 [82782, 87797] KOG0776 PRK14186 RVT_N RVT-GII GIIM Neighborhood of RT #2 [230504, 234221] PRK07432 RVT_N RVT-GII GIIM McrA Feature: gene Location: 82782-83699 bp Feature: domain Description: KOG0776 Location: 82815-83694 bp Feature: domain Description: KOG0776 Location: 82815-83694 bp Feature: gene Location: 83716-84585 bp Feature: domain Description: PRK14186 Location: 83728-84580 bp Feature: domain Description: PRK14186 Location: 83728-84580 bp Feature: gene Location: 84887-86266 bp Feature: RT Description: RVT_N Location: 84890-84998 bp Feature: RT Description: RVT_N Location: 84890-84998 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 85046-85694 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 85046-85694 bp Feature: domain Description: GIIM Note: maturase Location: 85781-86015 bp Feature: domain Description: GIIM Note: maturase Location: 85781-86015 bp Feature: gene Location: 86383-86667 bp Feature: gene Location: 87207-87797 bp Feature: gene Location: 230504-231376 bp Feature: domain Description: PRK07432 Location: 230507-231374 bp Feature: domain Description: PRK07432 Location: 230507-231374 bp Feature: gene Location: 231389-231697 bp Feature: gene Location: 231752-233548 bp Feature: RT Description: RVT_N Location: 231791-232037 bp Feature: RT Description: RVT_N Location: 231791-232037 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 232085-232736 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 232085-232736 bp Feature: domain Description: GIIM Note: maturase Location: 232838-233069 bp Feature: domain Description: GIIM Note: maturase Location: 232838-233069 bp Feature: domain Description: McrA Location: 233132-233498 bp Feature: domain Description: McrA Location: 233132-233498 bp Feature: gene Location: 233535-233720 bp Feature: gene Location: 233934-234221 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT KOG0776 (KOG0776, Geranylgeranyl pyrophosphate synthase/Polyprenyl synthetase ), PRK14186 (bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), PRK07432 (S-methyl-5'-thioadenosine phosphorylase), McrA (COG4058)

Seq: RFFC01000018.1 Hormoscilla sp. GUM202 Ga0115830_118, whole genome shotgun sequence (231047 bp)
Overview 1 RT 1: 59828-62944 bp 2 RT 2: 78384-84987 bp Neighborhood of RT #1 [59828, 62944] DDE_3 RVT-GII GIIM McrA SPS1 Neighborhood of RT #2 [78384, 85016] PRK14344 RaiA Ribosom_S30AE_C RVT_N RVT-GII GIIM McrA ZnuB ZnuC Feature: gene Location: 59828-59983 bp Feature: gene Location: 60233-60631 bp Feature: domain Description: DDE_3 Location: 60236-60545 bp Feature: domain Description: DDE_3 Location: 60236-60545 bp Feature: gene Location: 60610-61512 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 60646-60799 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 60646-60799 bp Feature: domain Description: GIIM Note: maturase Location: 60886-61120 bp Feature: domain Description: GIIM Note: maturase Location: 60886-61120 bp Feature: domain Description: McrA Location: 61198-61474 bp Feature: domain Description: McrA Location: 61198-61474 bp Feature: gene Location: 61588-62271 bp Feature: domain Description: SPS1 Location: 61618-62215 bp Feature: domain Description: SPS1 Location: 61618-62215 bp Feature: gene Location: 62735-62944 bp Feature: gene Location: 78384-79211 bp Feature: domain Description: PRK14344 Location: 78534-79161 bp Feature: domain Description: PRK14344 Location: 78534-79161 bp Feature: gene Location: 79484-80122 bp Feature: domain Description: RaiA Location: 79487-79820 bp Feature: domain Description: RaiA Location: 79487-79820 bp Feature: domain Description: Ribosom_S30AE_C Location: 79883-80036 bp Feature: domain Description: Ribosom_S30AE_C Location: 79883-80036 bp Feature: gene Location: 80847-82643 bp Feature: RT Description: RVT_N Location: 80886-81132 bp Feature: RT Description: RVT_N Location: 80886-8113 2 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 81180-81831 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 81180-81831 bp Feature: domain Description: GIIM Note: maturase Location: 81930-82164 bp Feature: domain Description: GIIM Note: maturase Location: 81930-82164 bp Feature: domain Description: McrA Location: 82218-82530 bp Feature: domain Description: McrA Location: 82218-82530 bp Feature: gene Location: 83350-84204 bp Feature: domain Description: ZnuB Location: 83353-84172 bp Feature: domain Description: ZnuB Location: 83353-84172 bp Feature: gene Location: 84204-85016 bp Feature: domain Description: ZnuC Location: 84291-84987 bp Feature: domain Description: ZnuC Location: 84291-84987 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_3 (pfam13358), RVT-GII, GIIM (pfam08388), McrA (COG4058), SPS1 (COG0515), PRK14344 (lipoyl(octanoyl) transferase LipB), RaiA (COG1544), Ribosom_S30AE_C (pfam16321), RVT_N (pfam13655), ZnuB (COG1108)
ZnuC (COG1121)

Seq: RFFC01000019.1 Hormoscilla sp. GUM202 Ga0115830_119, whole genome shotgun sequence (345613 bp)
Overview 1 RT 1: 116852-121093 bp 2 RT 2: 244170-255583 bp Neighborhood of RT #1 [116852, 121093] RVT_N RVT-GII GIIM RVT-GII GIIM McrA Neighborhood of RT #2 [244170, 255741] BrnA_antitoxin RVT_N RVT-GII GIIM McrA Peptidase_C14 EstA Peptidase_C14 pfam13191 7WD40 WD40 WD40 7WD40 7WD40 Feature: gene Location: 116852-118438 bp Feature: RT Description: RVT_N Location: 116891-117137 bp Feature: RT Description: RVT_N Location: 116891-117137 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 117185-117836 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 117185-117836 bp Feature: domain Description: GIIM Note: maturase Location: 117938-118169 bp Feature: domain Description: GIIM Note: maturase Location: 117938-118169 bp Feature: gene Location: 118646-118909 bp Feature: gene Location: 119184-120479 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 119187-119742 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 119187-119742 bp Feature: domain Description: GIIM Note: maturase Location: 119844-120075 bp Feature: domain Description: GIIM Note: maturase Location: 119844-120075 bp Feature: domain Description: McrA Location: 120171-120450 bp Feature: domain Description: McrA Location: 120171-120450 bp Feature: gene Location: 120568-120840 bp Feature: gene Location: 120884-121093 bp Feature: gene Location: 244170-244406 bp Feature: domain Description: BrnA_antitoxin Location: 244257-244404 bp Feature: domain Description: BrnA_antitoxin Location: 244257-244404 bp Feature: gene Location: 244643-244786 bp Feature: gene Location: 245551-247344 bp Feature: RT Description: RVT_N Location: 245590-245836 bp Feature: RT Description: RVT_N Location: 245590-245836 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 245884-246535 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 245884-246535 bp Feature: domain Description: GIIM Note: maturase Location: 246637-246868 bp Feature: domain Description: GIIM Note: maturase Location: 246637-246868 bp Feature: domain Description: McrA Location: 246964-247252 bp Feature: domain Description: McrA Location: 246964-247252 bp Feature: gene Location: 247395-251024 bp Feature: domain Description: Peptidase_C14 Location: 247401-248139 bp Feature: domain Description: Peptidase_C14 Location: 247401-248139 bp Feature: domain Description: EstA Location: 249927-250287 bp Feature: domain Description: EstA Location: 249927-250287 bp Feature: gene Location: 251359-255741 bp Feature: domain Description: Peptidase_C14 Location: 251389-252025 bp Feature: domain Description: Peptidase_C14 Location: 251389-252025 bp Feature: domain Description: pfam13191 Location: 252289-252682 bp Feature: domain Description: pfam13191 Location: 252289-252682 bp Feature: domain Description: 7WD40 Location: 253810-254212 bp Feature: domain Description: 7WD40 Location: 253810-254212 bp Feature: domain Description: WD40 Location: 254224-254320 bp Feature: domain Description: WD40 Location: 254224-254320 bp Feature: domain Description: WD40 Location: 254326-254443 bp Feature: domain Description: WD40 Location: 254326-254443 bp Feature: domain Description: 7WD40 Location: 254464-254971 bp Feature: domain Description: 7WD40 Location: 254464-254971 bp Feature: domain Description: 7WD40 Location: 255001-255583 bp Feature: domain Description: 7WD40 Location: 255001-255583 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), McrA (COG4058), BrnA_antitoxin (pfam14384), Peptidase_C14 (pfam00656), EstA (COG1075), pfam13191 (AAA_16;AAA ATPase domain), 7WD40 (sd00039), WD40 (smart00320)

Seq: RFFC01000024.1 Hormoscilla sp. GUM202 Ga0115830_124, whole genome shotgun sequence (216897 bp)
Overview 1 RT 1: 61734-67114 bp Neighborhood of RT #1 [61734, 67114] tcm_partner RVT_N RVT-GII GIIM McrA Feature: gene Location: 61734-62858 bp Feature: domain Description: tcm_partner Location: 61770-62529 bp Feature: domain Description: tcm_partner Location: 61770-62529 bp Feature: gene Location: 63030-63323 bp Feature: gene Location: 63631-65442 bp Feature: RT Description: RVT_N Location: 63670-63916 bp Feature: RT Description: RVT_N Location: 63670-63916 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 63964-64612 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 63964-64612 bp Feature: domain Description: GIIM Note: maturase Location: 64711-64945 bp Feature: domain Description: GIIM Note: maturase Location: 64711-64945 bp Feature: domain Description: McrA Location: 65035-65326 bp Feature: domain Description: McrA Location: 65035-65326 bp Feature: gene Location: 66284-66730 bp Feature: gene Location: 66812-67114 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT tcm_partner (TIGR04474), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), McrA (COG4058)

Seq: RFFC01000025.1 Hormoscilla sp. GUM202 Ga0115830_125, whole genome shotgun sequence (71809 bp)
Overview 1 RT 1: 53395-58854 bp Neighborhood of RT #1 [53395, 58919] PRK00222 PRK07413 RVT_N RVT-GII GIIM McrA DUF5357 Feature: gene Location: 53395-53796 bp Feature: domain Description: PRK00222 Location: 53407-53791 bp Feature: domain Description: PRK00222 Location: 53407-53791 bp Feature: gene Location: 53807-54940 bp Feature: domain Description: PRK07413 Location: 53810-54938 bp Feature: domain Description: PRK07413 Location: 53810-54938 bp Feature: gene Location: 54969-57500 bp Feature: RT Description: RVT_N Location: 55743-55989 bp Feature: RT Description: RVT_N Location: 55743-55989 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 56037-56688 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 56037-56688 bp Feature: domain Description: GIIM Note: maturase Location: 56790-57021 bp Feature: domain Description: GIIM Note: maturase Location: 56790-57021 bp Feature: domain Description: McrA Location: 57030-57444 bp Feature: domain Description: McrA Location: 57030-57444 bp Feature: gene Location: 57791-58315 bp Feature: gene Location: 58350-58919 bp Feature: domain Description: DUF5357 Location: 58353-58854 bp Feature: domain Description: DUF5357 Location: 58353-58854 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK00222 (peptide-methionine (R)-S-oxide reductase MsrB), PRK07413 (cob(I)yrinic acid a,c-diamide adenosyltransferase), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), McrA (COG4058), DUF5357 (pfam17310)

Seq: RFFC01000029.1 Hormoscilla sp. GUM202 Ga0115830_129, whole genome shotgun sequence (121167 bp)
Overview 1 RT 1: 80029-88449 bp Neighborhood of RT #1 [80029, 88556] alpha_am_amid AdoMet_MTases alpha_am_amid RVT_N RVT-GII GIIM HNH EmrE EmrE Feature: gene Location: 80029-83919 bp Feature: domain Description: alpha_am_amid Location: 80089-81031 bp Feature: domain Description: alpha_am_amid Location: 80089-81031 bp Feature: domain Description: AdoMet_MTases Location: 81229-81592 bp Feature: domain Description: AdoMet_MTases Location: 81229-81592 bp Feature: domain Description: alpha_am_amid Location: 82237-83905 bp Feature: domain Description: alpha_am_amid Location: 82237-83905 bp Feature: gene Location: 84064-84828 bp Feature: gene Location: 85298-87091 bp Feature: RT Description: RVT_N Location: 85337-85583 bp Feature: RT Description: RVT_N Location: 85337-85583 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 85631-86279 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 85631-86279 bp Feature: domain Description: GIIM Note: maturase Location: 86381-86612 bp Feature: domain Description: GIIM Note: maturase Location: 86381-86612 bp Feature: domain Description: HNH Note: nucleases Location: 86837-86972 bp Feature: domain Description: HNH Note: nucleases Location: 86837-86972 bp Feature: gene Location: 87748-88071 bp Feature: domain Description: EmrE Location: 87754-88042 bp Feature: domain Description: EmrE Location: 87754-88042 bp Feature: gene Location: 88050-88556 bp Feature: domain Description: EmrE Location: 88143-88449 bp Feature: domain Description: EmrE Location: 88143-88449 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT alpha_am_amid (TIGR03443), AdoMet_MTases (cl17173), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNH (pfam01844), EmrE (pfam13536)

Seq: RFFC01000030.1 Hormoscilla sp. GUM202 Ga0115830_130, whole genome shotgun sequence (316353 bp)
Overview 1 RT 1: 41909-45279 bp 2 RT 2: 184706-187925 bp Neighborhood of RT #1 [41909, 45353] N6_N4_Mtase RVT_N RVT-GII GIIM HNH N6_N4_Mtase Neighborhood of RT #2 [184706, 187942] RVT-GII GIIM McrA LdcA HEAT Feature: gene Location: 41909-42175 bp Feature: domain Description: N6_N4_Mtase Location: 42017-42164 bp Feature: domain Description: N6_N4_Mtase Location: 42017-42164 bp Feature: gene Location: 42196-42576 bp Feature: gene Location: 42701-44428 bp Feature: RT Description: RVT_N Location: 42818-43064 bp Feature: RT Description: RVT_N Location: 42818 -43064 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 43112-43760 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 43112-43760 bp Feature: domain Description: GIIM Note: maturase Location: 43859-44093 bp Feature: domain Description: GIIM Note: maturase Location: 43859-44093 bp Feature: gene Location: 44406-44603 bp Feature: domain Description: HNH Note: nucleases Location: 44415-44490 bp Feature: domain Description: HNH Note: nucleases Location: 44415-44490 bp Feature: gene Location: 44634-45353 bp Feature: domain Description: N6_N4_Mtase Location: 44754-45279 bp Feature: domain Description: N6_N4_Mtase Location: 44754-45279 bp Feature: gene Location: 184706-186031 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 184862-185228 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18 4862-18 5228 bp Feature: domain Description: GIIM Note: maturase Location: 185327-185561 bp Feature: domain Description: GIIM Note: maturase Location: 18 5327-18 5561 bp Feature: domain Description: McrA Location: 185624-185945 bp Feature: domain Description: McrA Location: 18 5624-18 5945 bp Feature: gene Location: 186211-187239 bp Feature: domain Description: LdcA Location: 186322-187228 bp Feature: domain Description: LdcA Location: 18 6322-18 7228 bp Feature: gene Location: 187274-187942 bp Feature: domain Description: HEAT Location: 187280-187925 bp Feature: domain Description: HEAT Location: 18 7280-18 7925 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT N6_N4_Mtase (pfam01555), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNH (pfam01844), McrA (COG4058), LdcA (COG1619), HEAT (sd00044)

Seq: RFFC01000032.1 Hormoscilla sp. GUM202 Ga0115830_132, whole genome shotgun sequence (175462 bp)
Overview 1 RT 1: 12310-17606 bp 2 RT 2: 132667-139545 bp Neighborhood of RT #1 [12310, 17606] PRK02714 RVT_N RVT-GII GIIM McrA PRK07445 Neighborhood of RT #2 [132667, 139545] COG5635 TPR clpS TIGR00266 RVT-GII GIIM McrA Feature: gene Location: 12310-13404 bp Feature: domain Description: PRK02714 Location: 12322-13399 bp Feature: domain Description: PRK02714 Location: 12322-13399 bp Feature: gene Location: 13660-13845 bp Feature: gene Location: 14058-15842 bp Feature: RT Description: RVT_N Location: 14097-14343 bp Feature: RT Description: RVT_N Location: 14097-14343 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14391-15033 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14391-15033 bp Feature: domain Description: GIIM Note: maturase Location: 15135-15366 bp Feature: domain Description: GIIM Note: maturase Location: 15135-15366 bp Feature: domain Description: McrA Location: 15459-15747 bp Feature: domain Description: McrA Location: 15459-15747 bp Feature: gene Location: 15974-17329 bp Feature: domain Description: PRK07445 Location: 15980-17321 bp Feature: domain Description: PRK07445 Location: 15980-17321 bp Feature: gene Location: 17457-17606 bp Feature: gene Location: 132667-135003 bp Feature: domain Description: COG5635 Location: 132913-133477 bp Feature: domain Description: COG5635 Location: 132913-133477 bp Feature: domain Description: TPR Location: 134455-134683 bp Feature: domain Description: TPR Location: 134455-134683 bp Feature: domain Description: clpS Location: 134776-134992 bp Feature: domain Description: clpS Location: 134776-134992 bp Feature: gene Location: 135128-135790 bp Feature: domain Description: TIGR00266 Location: 135131-135779 bp Feature: domain Description: TIGR00266 Location: 135131-135779 bp Feature: gene Location: 136176-138554 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 137661-137745 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 137661-137745 bp Feature: domain Description: GIIM Note: maturase Location: 137844-138078 bp Feature: domain Description: GIIM Note: maturase Location: 137844-138078 bp Feature: domain Description: McrA Location: 138144-138459 bp Feature: domain Description: McrA Location: 138144-138459 bp Feature: gene Location: 138856-139200 bp Feature: gene Location: 139222-139545 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK02714 (o-succinylbenzoate synthase), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), McrA (COG4058), PRK07445 (O-succinylbenzoic acid--CoA ligase; Reviewed), COG5635 (Predicted NTPase, NACHT family domain ), TPR (smart00028), clpS, TIGR00266 (TIGR00266 family protein)

Seq: RFFC01000033.1 Hormoscilla sp. GUM202 Ga0115830_133, whole genome shotgun sequence (78439 bp)
Overview 1 RT 1: 53188-59196 bp Neighborhood of RT #1 [53188, 59196] HNHc ResIII RVT_N RVT-GII GIIM McrA Feature: gene Location: 53188-55824 bp Feature: domain Description: HNHc Note: nucleases Location: 53281-53419 bp Feature: domain Description: HNHc Note: nucleases Location: 53281-53419 bp Feature: domain Description: ResIII Location: 53578-54043 bp Feature: domain Description: ResIII Location: 53578-54043 bp Feature: gene Location: 56041-56718 bp Feature: gene Location: 56851-58644 bp Feature: RT Description: RVT_N Location: 56890-57136 bp Feature: RT Description: RVT_N Location: 56890-57136 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 57184-57829 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 57184-57829 bp Feature: domain Description: GIIM Note: maturase Location: 57928-58162 bp Feature: domain Description: GIIM Note: maturase Location: 57928-58162 bp Feature: domain Description: McrA Location: 58249-58525 bp Feature: domain Description: McrA Location: 58249-58525 bp Feature: gene Location: 58851-59024 bp Feature: gene Location: 58960-59196 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HNHc (smart00507), ResIII (pfam04851), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), McrA (COG4058)

Seq: RFFC01000037.1 Hormoscilla sp. GUM202 Ga0115830_137, whole genome shotgun sequence (54637 bp)
Overview 1 RT 1: 1021-4541 bp 2 RT 2: 7203-14498 bp 3 RT 3: 50730-54353 bp Neighborhood of RT #1 [1021, 4639] PRK07455 RVT_N RVT-GII GIIM GIIM McrA Neighborhood of RT #2 [7203, 14498] RVT_N RVT-GII GIIM HNH clan_AA_DTGF poly_P_AMP_trns RVT_N RVT-GII GIIM McrA Neighborhood of RT #3 [50730, 54353] apcD RVT_N RVT-GII GIIM McrA Feature: gene Location: 1021-1377 bp Feature: domain Description: PRK07455 Location: 1048-1303 bp Feature: domain Description: PRK07455 Location: 1048-1303 bp Feature: gene Location: 1569-3134 bp Feature: RT Description: RVT_N Location: 1608-1854 bp Feature: RT Description: RVT_N Location: 1608-1854 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1902-2553 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1902-2553 bp Feature: domain Description: GIIM Note: maturase Location: 2640-2874 bp Feature: domain Description: GIIM Note: maturase Location: 2640-2874 bp Feature: gene Location: 3160-3360 bp Feature: gene Location: 3809-4639 bp Feature: domain Description: GIIM Note: maturase Location: 3941-4172 bp Feature: domain Description: GIIM Note: maturase Location: 3941-4172 bp Feature: domain Description: McrA Location: 4238-4541 bp Feature: domain Description: McrA Location: 4238-4541 bp Feature: gene Location: 7203-8996 bp Feature: RT Description: RVT_N Location: 7242-7488 bp Feature: RT Description: RVT_N Location: 7242-7488 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7536-8184 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7536-8184 bp Feature: domain Description: GIIM Note: maturase Location: 8286-8517 bp Feature: domain Description: GIIM Note: maturase Location: 8286-8517 bp Feature: domain Description: HNH Note: nucleases Location: 8742-8877 bp Feature: domain Description: HNH Note: nucleases Location: 8742-8877 bp Feature: gene Location: 9018-9431 bp Feature: domain Description: clan_AA_DTGF Location: 9111-9384 bp Feature: domain Description: clan_AA_DTGF Location: 9111-9384 bp Feature: gene Location: 9514-11001 bp Feature: domain Description: poly_P_AMP_trns Location: 9520-10990 bp Feature: domain Description: poly_P_AMP_trns Location: 9520-10990 bp Feature: gene Location: 11262-11504 bp Feature: gene Location: 11538-11915 bp Feature: gene Location: 11949-13805 bp Feature: RT Description: RVT_N Location: 12051-12297 bp Feature: RT Description: RVT_N Location: 12051-12297 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12345-12996 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12345-12996 bp Feature: domain Description: GIIM Note: maturase Location: 13098-13329 bp Feature: domain Description: GIIM Note: maturase Location: 13098-13329 bp Feature: domain Description: McrA Location: 13425-13710 bp Feature: domain Description: McrA Location: 13425-13710 bp Feature: gene Location: 13995-14273 bp Feature: gene Location: 14367-14498 bp Feature: gene Location: 50730-51344 bp Feature: gene Location: 51756-52133 bp Feature: domain Description: apcD Location: 51762-52131 bp Feature: domain Description: apcD Location: 51762-521 31 bp Feature: gene Location: 52240-54096 bp Feature: RT Description: RVT_N Location: 52342-52588 bp Feature: RT Description: RVT_N Location: 52342-52588 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 52636-53287 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 52636-53287 bp Feature: domain Description: GIIM Note: maturase Location: 53389-53620 bp Feature: domain Description: GIIM Note: maturase Location: 53389-53620 bp Feature: domain Description: McrA Location: 53677-53986 bp Feature: domain Description: McrA Location: 53677-53986 bp Feature: gene Location: 54027-54353 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK07455 (bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), McrA (COG4058), HNH (pfam01844), clan_AA_DTGF, poly_P_AMP_trns (TIGR03708), apcD (CHL00090)

Seq: RFFC01000038.1 Hormoscilla sp. GUM202 Ga0115830_138, whole genome shotgun sequence (87097 bp)
Overview 1 RT 1: 78490-83585 bp Neighborhood of RT #1 [78490, 83585] RVT-GII GIIM McrA RVT-GII RVT_N RVT-GII LipA Feature: gene Location: 78490-79401 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 78493-78667 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 78493-78667 bp Feature: domain Description: GIIM Note: maturase Location: 78769-79000 bp Feature: domain Description: GIIM Note: maturase Location: 78769-79000 bp Feature: domain Description: McrA Location: 79096-79375 bp Feature: domain Description: McrA Location: 79096-79375 bp Feature: gene Location: 79385-79672 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 79466-79646 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 79466-79646 bp Feature: gene Location: 80579-81205 bp Feature: RT Description: RVT_N Location: 80618-80864 bp Feature: RT Description: RVT_N Location: 80618-80864 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 80912-81185 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 80912-81185 bp Feature: gene Location: 81937-82839 bp Feature: domain Description: LipA Location: 81943-82786 bp Feature: domain Description: LipA Location: 81943-82786 bp Feature: gene Location: 83457-83585 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), McrA (COG4058), RVT_N (pfam13655), LipA (COG0320)

Seq: RFFC01000040.1 Hormoscilla sp. GUM202 Ga0115830_140, whole genome shotgun sequence (107913 bp)
Overview 1 RT 1: 744-11909 bp Neighborhood of RT #1 [744, 12058] RVT_N RVT-GII RVT-GII GIIM McrA fliH RVT_N RVT-GII GIIM McrA COG4639 DDE_Tnp_IS66 Feature: gene Location: 744-872 bp Feature: gene Location: 937-1137 bp Feature: gene Location: 1514-3028 bp Feature: RT Description: RVT_N Location: 1553-1793 bp Feature: RT Description: RVT_N Location: 1553-1793 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1850-2273 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1850-2273 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2276-2444 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2276-2444 bp Feature: domain Description: GIIM Note: maturase Location: 2501-2684 bp Feature: domain Description: GIIM Note: maturase Location: 2501-2684 bp Feature: domain Description: McrA Location: 2696-2999 bp Feature: domain Description: McrA Location: 2696-2999 bp Feature: gene Location: 3143-3322 bp Feature: gene Location: 3362-3571 bp Feature: gene Location: 5405-6496 bp Feature: domain Description: fliH Location: 6152-6338 bp Feature: domain Description: fliH Location: 6152-6338 bp Feature: gene Location: 6907-7104 bp Feature: gene Location: 7487-9277 bp Feature: RT Description: RVT_N Location: 7526-7772 bp Feature: RT Description: RVT_N Location: 7526-7772 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7820-8468 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7820-8468 bp Feature: domain Description: GIIM Note: maturase Location: 8570-8801 bp Feature: domain Description: GIIM Note: maturase Location: 8570-8801 bp Feature: domain Description: McrA Location: 8858-9191 bp Feature: domain Description: McrA Location: 8858-9191 bp Feature: gene Location: 9287-10396 bp Feature: domain Description: COG4639 Location: 9317-9770 bp Feature: domain Description: COG4639 Location: 9317-9770 bp Feature: gene Location: 11690-12058 bp Feature: domain Description: DDE_Tnp_IS66 Location: 11714-11909 bp Feature: domain Description: DDE_Tnp_IS66 Location: 11714-11909 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), McrA (COG4058), DDE_Tnp_IS66 (pfam03050), fliH (PRK13386), COG4639 (Predicted kinase )

Seq: RFFC01000041.1 Hormoscilla sp. GUM202 Ga0115830_141, whole genome shotgun sequence (130428 bp)
Overview 1 RT 1: 291-3559 bp 2 RT 2: 109398-114031 bp 3 RT 3: 120507-126231 bp Neighborhood of RT #1 [291, 3559] RVT_N RVT-GII RVT-GII RVT-GII GIIM McrA PRK12467 Neighborhood of RT #2 [109398, 114031] InsQ RVT_N RVT-GII GIIM Neighborhood of RT #3 [120507, 126231] RVT_N RVT-GII RVT-GII GIIM McrA OrfB_IS605 Feature: gene Location: 291-695 bp Feature: RT Description: RVT_N Location: 330-576 bp Feature: RT Description: RVT_N Location: 330-576 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 624-690 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 624 -690 bp Feature: gene Location: 699-1055 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 702-963 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 702-963 bp Feature: gene Location: 1298-1630 bp Feature: gene Location: 1724-2905 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1787-2117 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1787-2117 bp Feature: domain Description: GIIM Note: maturase Location: 2204-2438 bp Feature: domain Description: GIIM Note: maturase Location: 2204-24 38 bp Feature: domain Description: McrA Location: 2513-2792 bp Feature: domain Description: McrA Location: 2513-2792 bp Feature: gene Location: 3131-3295 bp Feature: domain Description: PRK12467 Location: 3134-3212 bp Feature: domain Description: PRK124 67 Location: 3134-3212 bp Feature: gene Location: 3338-3559 bp Feature: gene Location: 109398-110951 bp Feature: domain Description: InsQ Location: 109833-110922 bp Feature: domain Description: InsQ Location: 109833-110922 bp Feature: gene Location: 110953-111102 bp Feature: gene Location: 111188-112837 bp Feature: RT Description: RVT_N Location: 111290-111536 bp Feature: RT Description: RVT_N Location: 111290-111536 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 111584-112235 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 111584-112235 bp Feature: domain Description: GIIM Note: maturase Location: 112337-112568 bp Feature: domain Description: GIIM Note: maturase Location: 112337-112568 bp Feature: gene Location: 112982-113245 bp Feature: gene Location: 113687-114031 bp Feature: gene Location: 120507-120737 bp Feature: gene Location: 121951-122337 bp Feature: gene Location: 122540-122944 bp Feature: RT Description: RVT_N Location: 122579-122825 bp Feature: RT Description: RVT_N Location: 122579-122825 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 122873-122939 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 122873-122939 bp Feature: gene Location: 122948-124318 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 122951-123530 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 122951-123530 bp Feature: domain Description: GIIM Note: maturase Location: 123617-123851 bp Feature: domain Description: GIIM Note: maturase Location: 123617-123851 bp Feature: domain Description: McrA Location: 123905-124253 bp Feature: domain Description: McrA Location: 123905-124 253 bp Feature: gene Location: 125418-125621 bp Feature: domain Description: OrfB_IS605 Location: 125457-125616 bp Feature: domain Description: OrfB_IS605 Location: 125457-125616 bp Feature: gene Location: 126022-126231 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), McrA (COG4058), PRK12467 (peptide synthase; Provisional), InsQ (COG0675), OrfB_IS605 (pfam01385)

Seq: RFFC01000042.1 Hormoscilla sp. GUM202 Ga0115830_142, whole genome shotgun sequence (49725 bp)
Overview 1 RT 1: 352-5740 bp Neighborhood of RT #1 [352, 5874] DDE_3 BaeS RVT-GII RVT-GII GIIM McrA nit KefB Feature: gene Location: 352-825 bp Feature: domain Description: DDE_3 Location: 373-769 bp Feature: domain Description: DDE_3 Location: 373-769 bp Feature: gene Location: 839-1105 bp Feature: domain Description: BaeS Location: 845-1097 bp Feature: domain Description: BaeS Location: 845-1097 bp Feature: gene Location: 1135-1419 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1138-1366 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1138-1366 bp Feature: gene Location: 1451-2620 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1463-1829 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1463-1829 bp Feature: domain Description: GIIM Note: maturase Location: 1916-2150 bp Feature: domain Description: GIIM Note: maturase Location: 1916-2150 bp Feature: domain Description: McrA Location: 2204-2552 bp Feature: domain Description: McrA Location: 2204-25 52 bp Feature: gene Location: 3466-4278 bp Feature: domain Description: nit Location: 3484-4267 bp Feature: domain Description: nit Location: 3484-4267 bp Feature: gene Location: 4339-5874 bp Feature: domain Description: KefB Location: 4483-5740 bp Feature: domain Description: KefB Location: 4483-5740 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), McrA (COG4058), nit (cd07572), BaeS (COG0642), KefB (COG0475)

Seq: RFFC01000044.1 Hormoscilla sp. GUM202 Ga0115830_144, whole genome shotgun sequence (75192 bp)
Overview 1 RT 1: 9277-13126 bp Neighborhood of RT #1 [9277, 13126] DUF4351 MFS_FucP_MFSD4_like RVT_N RVT-GII GIIM HNH Feature: gene Location: 9277-9531 bp Feature: domain Description: DUF4351 Location: 9379-9514 bp Feature: domain Description: DUF4351 Location: 9379-9514 bp Feature: gene Location: 9742-10482 bp Feature: domain Description: MFS_FucP_MFSD4_like Location: 9799-10438 bp Feature: domain Description: MFS_FucP_MFSD4_like Location: 9799-10438 bp Feature: gene Location: 10580-12370 bp Feature: RT Description: RVT_N Location: 10619-10865 bp Feature: RT Description: RVT_N Location: 10619-10865 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10916-11558 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10916-11558 bp Feature: domain Description: GIIM Note: maturase Location: 11657-11891 bp Feature: domain Description: GIIM Note: maturase Location: 11657-11891 bp Feature: domain Description: HNH Note: nucleases Location: 12116-12254 bp Feature: domain Description: HNH Note: nucleases Location: 12116-12254 bp Feature: gene Location: 12489-12692 bp Feature: gene Location: 12956-13126 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNH (pfam01844), DUF4351 (pfam14261), MFS_FucP_MFSD4_like (cd17333)

Seq: RFFC01000045.1 Hormoscilla sp. GUM202 Ga0115830_145, whole genome shotgun sequence (30264 bp)
Overview 1 RT 1: 27541-29472 bp Neighborhood of RT #1 [27541, 29678] PulG RVT_N RVT-GII GIIM Feature: gene Location: 27541-27705 bp Feature: domain Description: PulG Location: 27559-27691 bp Feature: domain Description: PulG Location: 27 559-27 691 bp Feature: gene Location: 28196-28405 bp Feature: gene Location: 28422-29678 bp Feature: RT Description: RVT_N Location: 28428-28533 bp Feature: RT Description: RVT_N Location: 28428-28533 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 28581-29232 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 28581-29232 bp Feature: domain Description: GIIM Note: maturase Location: 29319-29472 bp Feature: domain Description: GIIM Note: maturase Location: 29319-29472 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PulG (pfam11773), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: RFFC01000058.1 Hormoscilla sp. GUM202 Ga0115830_158, whole genome shotgun sequence (7444 bp)
Overview 1 RT 1: 4643-7366 bp Neighborhood of RT #1 [4643, 7431] RVT_N RVT-GII GIIM McrA Feature: gene Location: 4643-4831 bp Feature: gene Location: 4904-5275 bp Feature: gene Location: 5656-7431 bp Feature: RT Description: RVT_N Location: 5695-5941 bp Feature: RT Description: RVT_N Location: 5695-5941 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5989-6640 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5989-6640 bp Feature: domain Description: GIIM Note: maturase Location: 6727-6961 bp Feature: domain Description: GIIM Note: maturase Location: 6727-6961 bp Feature: domain Description: McrA Location: 7039-7366 bp Feature: domain Description: McrA Location: 7039-7366 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), McrA (COG4058)

Seq: RFFC01000060.1 Hormoscilla sp. GUM202 Ga0115830_160, whole genome shotgun sequence (6063 bp)
Overview 1 RT 1: 1-3061 bp Neighborhood of RT #1 [1, 3061] HNH RVT_N RVT-GII RVT-GII GIIM McrA MPN_like Feature: gene Location: 1-213 bp Feature: domain Description: HNH Note: nucleases Location: 4-91 bp Feature: domain Description: HNH Note: nucleases Location: 4-91 bp Feature: gene Location: 375-1508 bp Feature: RT Description: RVT_N Location: 378-486 bp Feature: RT Description: RVT_N Location: 378-486 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 534-1185 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 534-1185 bp Feature: gene Location: 1432-2370 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1477-1672 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1477-1672 bp Feature: domain Description: GIIM Note: maturase Location: 1759-1993 bp Feature: domain Description: GIIM Note: maturase Location: 1759-1993 bp Feature: domain Description: McrA Location: 2077-2347 bp Feature: domain Description: McrA Location: 2077-2347 bp Feature: gene Location: 2413-2664 bp Feature: domain Description: MPN_like Location: 2461-2611 bp Feature: domain Description: MPN_like Location: 2461-2611 bp Feature: gene Location: 2870-3061 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HNH (pfam01844), RVT-GII, GIIM (pfam08388), McrA (COG4058), MPN_like (cd08070), RVT_N (pfam13655)

Seq: RFFC01000062.1 Hormoscilla sp. GUM202 Ga0115830_162, whole genome shotgun sequence (4770 bp)
Overview 1 RT 1: 417-4338 bp Neighborhood of RT #1 [417, 4466] RVT-GII RVT-GII GIIM McrA CsdA RND_mfp RND_mfp Feature: gene Location: 417-704 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 498-678 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 498-678 bp Feature: gene Location: 688-1599 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 691-865 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 691-865 bp Feature: domain Description: GIIM Note: maturase Location: 967-1198 bp Feature: domain Description: GIIM Note: maturase Location: 967-1198 bp Feature: domain Description: McrA Location: 1294-1573 bp Feature: domain Description: McrA Location: 1294-1573 bp Feature: gene Location: 1628-1771 bp Feature: gene Location: 1881-4466 bp Feature: domain Description: CsdA Location: 1986-3228 bp Feature: domain Description: CsdA Location: 1986-3228 bp Feature: domain Description: RND_mfp Location: 3513-3906 bp Feature: domain Description: RND_mfp Location: 3513-3906 bp Feature: domain Description: RND_mfp Location: 4056-4338 bp Feature: domain Description: RND_mfp Location: 4056-4338 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), McrA (COG4058), CsdA (COG0520), RND_mfp (TIGR01730)