myRT

myRT report for GCA_005574095.1_ASM557409v1

Download annotations/find similar RTs

Seq: SZTZ01000006.1 (8826 bp)
Overview 1 RT 1: 5214-8626 bp Neighborhood of RT #1 [5214, 8634] InsE PHA02517 RVT-GII GIIM Tra5 Feature: gene Location: 5214-5513 bp Feature: domain Description: InsE Location: 5244-5508 bp Feature: domain Description: InsE Location: 5244-5508 bp Feature: gene Location: 5510-5977 bp Feature: domain Description: PHA02517 Location: 5576-5915 bp Feature: domain Description: PHA0251 7 Location: 5576-591 5 bp Feature: gene Location: 6569-7810 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6842-7574 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6842-7574 bp Feature: domain Description: GIIM Note: maturase Location: 7649-7805 bp Feature: domain Description: GIIM Note: maturase Location: 7649-7805 bp Feature: gene Location: 7862-8092 bp Feature: gene Location: 8203-8634 bp Feature: domain Description: Tra5 Location: 8209-8626 bp Feature: domain Description: Tra5 Location: 8209-8626 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), Tra5 (COG2801)

Seq: SZTZ01000201.1 (34146 bp)
Overview 1 RT 1: 9280-15637 bp Neighborhood of RT #1 [9280, 15774] RVT-UG5 nitrilase AbiEi_3_N AbiEi_3 AbiEii Feature: gene Location: 9280-9426 bp Feature: gene Location: 9743-10213 bp Feature: gene Location: 10560-13769 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 11088-11577 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 11088-11577 bp Feature: domain Description: nitrilase Location: 13083-13680 bp Feature: domain Description: nitrilase Location: 13083-13680 bp Feature: gene Location: 14064-14867 bp Feature: domain Description: AbiEi_3_N Location: 14097-14358 bp Feature: domain Description: AbiEi_3_N Location: 14097-14358 bp Feature: domain Description: AbiEi_3 Location: 14370-14826 bp Feature: domain Description: AbiEi_3 Location: 14370-1482 6 bp Feature: gene Location: 14854-15774 bp Feature: domain Description: AbiEii Location: 14896-15637 bp Feature: domain Description: AbiEii Location: 14896-15637 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG5, nitrilase (cl11424), AbiEi_3_N (pfam17194), AbiEi_3 (pfam11459), AbiEii (pfam08843)