myRT

myRT report for GCA_005670915.1_ASM567091v1

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Seq: SEVN01000001.1 (90397 bp)
Overview 1 RT 1: 49051-53320 bp Neighborhood of RT #1 [49051, 53320] DUF905 PRK13732 RVT-GII Intron_maturas2 HNHc Feature: gene Location: 49051-49284 bp Ori: TLH97453.1 Feature: domain Description: DUF905 Location: 49081-49279 bp Feature: domain Description: DUF905 Location: 49081 -49279 bp Feature: gene Location: 49342-49827 bp Ori: TLH97454.1 Gene: ssb Feature: domain Description: PRK13732 Location: 49345-49825 bp Feature: domain Description: PRK1 3732 Location: 49345-49825 bp Feature: gene Location: 49977-51878 bp Ori: TLH97455.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 50244-51075 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 50244-51 075 bp Feature: domain Description: Intron_maturas2 Location: 51189-51447 bp Feature: domain Description: Intron_maturas2 Location: 51 1 89-51 447 bp Feature: domain Description: HNHc Note: nucleases Location: 51621-51783 bp Feature: domain Description: HNHc Note: nucleases Location: 51 621 -51 783 bp Feature: gene Location: 52527-52733 bp Feature: gene Location: 53222-53320 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF905 (pfam06006), PRK13732 (single-stranded DNA-binding protein; Provisional), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: SEVN01000002.1 (5309469 bp)
Overview 1 RT 1: 4356641-4361539 bp 2 RT 2: 5014490-5018048 bp Neighborhood of RT #1 [4356641, 4361539] RVT-Retrons Neighborhood of RT #2 [5014490, 5018419] SLATT_5 RVT-UG17 Caudo_TAP Macro_Appr_pase Feature: gene Location: 4356641-4356871 bp Feature: gene Location: 4357086-4357325 bp Feature: gene Location: 4357896-4359653 bp Ori: TLH86642.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 4358040-4358658 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 4358040-4358658 bp Feature: gene Location: 4359900-4361027 bp Feature: gene Location: 4361024-4361539 bp Feature: gene Location: 5014490-5014667 bp Feature: gene Location: 5014912-5015463 bp Ori: TLH87244.1 Feature: domain Description: SLATT_5 Location: 5014921-5015434 bp Feature: domain Description: SLATT_5 Location: 501492 1-5015434 bp Feature: gene Location: 5015441-5016811 bp Ori: TLH87245.1 Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 5015669-5016275 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 5015669-50162 75 bp Feature: gene Location: 5016924-5017508 bp Ori: TLH87246.1 Feature: domain Description: Caudo_TAP Location: 5017140-5017497 bp Feature: domain Description: Caudo_TAP Location: 5017140-5017497 bp Feature: gene Location: 5017517-5018419 bp Ori: TLH87247.1 Feature: domain Description: Macro_Appr_pase Location: 5017535-5018048 bp Feature: domain Description: Macro_Appr_pase Location: 5017535-5018048 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, SLATT_5 (pfam18160), RVT-UG17, Caudo_TAP (pfam02413), Macro_Appr_pase (cd02900)

Seq: SEVN01000005.1 (135627 bp)
Overview 1 RT 1: 4449-8177 bp 2 RT 2: 127505-131233 bp Neighborhood of RT #1 [4449, 8182] RVT-GII Intron_maturas2 HNHc PRK13732 DUF905 Neighborhood of RT #2 [127505, 131238] RVT-GII Intron_maturas2 HNHc PRK13732 DUF905 Feature: gene Location: 4449-4655 bp Feature: gene Location: 4642-4719 bp Feature: gene Location: 5333-7234 bp Ori: TLH81936.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5600-6431 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5600-643 1 bp Feature: domain Description: Intron_maturas2 Location: 6545-6803 bp Feature: domain Description: Intron_maturas2 Location: 6545-6803 bp Feature: domain Description: HNHc Note: nucleases Location: 6977-7139 bp Feature: domain Description: HNHc Note: nucleases Location: 6977-713 9 bp Feature: gene Location: 7384-7881 bp Ori: TLH81937.1 Gene: ssb Feature: domain Description: PRK13732 Location: 7387-7879 bp Feature: domain Description: PRK13 73 2 Location: 73 87-7879 bp Feature: gene Location: 7949-8182 bp Ori: TLH81938.1 Feature: domain Description: DUF905 Location: 7979-8177 bp Feature: domain Description: DUF905 Location: 7979-8177 bp Feature: gene Location: 127505-127711 bp Feature: gene Location: 127698-127775 bp Feature: gene Location: 128389-130290 bp Ori: TLH82064.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 128656-129487 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 128656-129487 bp Feature: domain Description: Intron_maturas2 Location: 129601-129859 bp Feature: domain Description: Intron_maturas2 Location: 129601-129859 bp Feature: domain Description: HNHc Note: nucleases Location: 130033-130195 bp Feature: domain Description: HNHc Note: nucleases Location: 13 003 3 -13 0195 bp Feature: gene Location: 130440-130937 bp Ori: TLH82065.1 Gene: ssb Feature: domain Description: PRK13732 Location: 130443-130935 bp Feature: domain Description: PRK13 73 2 Location: 13 0443 -13 093 5 bp Feature: gene Location: 131005-131238 bp Ori: TLH82066.1 Feature: domain Description: DUF905 Location: 131035-131233 bp Feature: domain Description: DUF905 Location: 13 103 5-13 123 3 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), PRK13732 (single-stranded DNA-binding protein; Provisional), DUF905 (pfam06006)