myRT

myRT report for GCA_005670925.1_ASM567092v1

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Seq: SEVQ01000002.1 (182177 bp)
Overview 1 RT 1: 91421-94311 bp 2 RT 2: 105048-108836 bp 3 RT 3: 147233-150956 bp Neighborhood of RT #1 [91421, 94711] Sigma70_r4_2 Sigma70_r4_2 PRK10173 RVT-GII InsE Neighborhood of RT #2 [105048, 108874] InsE RVT-GII GIIM PHA02517 InsE Neighborhood of RT #3 [147233, 150961] RVT-GII Intron_maturas2 HNHc PRK13732 DUF905 Feature: gene Location: 91421-91906 bp Ori: TLI07588.1 Feature: domain Description: Sigma70_r4_2 Location: 91481-91553 bp Feature: domain Description: Sigma70_r4_2 Location: 91 481 -91 553 bp Feature: domain Description: Sigma70_r4_2 Location: 91622-91682 bp Feature: domain Description: Sigma70_r4_2 Location: 91 622-91 682 bp Feature: gene Location: 92028-92661 bp Feature: domain Description: PRK10173 Location: 92031-92469 bp Feature: domain Description: PRK1 01 73 Location: 92031 -92469 bp Feature: gene Location: 92811-93299 bp Ori: TLI07684.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 93069-93138 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 93069-931 38 bp Feature: gene Location: 93608-93979 bp Feature: gene Location: 93972-94711 bp Feature: domain Description: InsE Location: 93975-94311 bp Feature: domain Description: InsE Location: 93975-9431 1 bp Feature: gene Location: 105048-105787 bp Feature: domain Description: InsE Location: 105051-105387 bp Feature: domain Description: InsE Location: 1 05051 -1 05387 bp Feature: gene Location: 105780-106151 bp Feature: gene Location: 106460-107968 bp Ori: TLI07686.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 106718-107450 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 0671 8-1 07450 bp Feature: domain Description: GIIM Note: maturase Location: 107525-107723 bp Feature: domain Description: GIIM Note: maturase Location: 1 07525-1 07723 bp Feature: gene Location: 108058-108441 bp Feature: domain Description: PHA02517 Location: 108064-108397 bp Feature: domain Description: PHA0251 7 Location: 1 08064-1 08397 bp Feature: gene Location: 108470-108874 bp Ori: TLI07603.1 Feature: domain Description: InsE Location: 108500-108836 bp Feature: domain Description: InsE Location: 1 08500-1 08836 bp Feature: gene Location: 147233-147439 bp Feature: gene Location: 147426-147503 bp Feature: gene Location: 148117-150018 bp Ori: TLI07641.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 148384-149215 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 48384-1 4921 5 bp Feature: domain Description: Intron_maturas2 Location: 149329-149587 bp Feature: domain Description: Intron_maturas2 Location: 1 49329-1 49587 bp Feature: domain Description: HNHc Note: nucleases Location: 149761-149923 bp Feature: domain Description: HNHc Note: nucleases Location: 1 49761 -1 49923 bp Feature: gene Location: 150168-150665 bp Ori: TLI07642.1 Gene: ssb Feature: domain Description: PRK13732 Location: 150171-150663 bp Feature: domain Description: PRK1 3732 Location: 1 501 71 -1 50663 bp Feature: gene Location: 150728-150961 bp Ori: TLI07643.1 Feature: domain Description: DUF905 Location: 150758-150956 bp Feature: domain Description: DUF905 Location: 1 50758-1 50956 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Sigma70_r4_2 (pfam08281), PRK10173 (glucose-1-phosphatase/inositol phosphatase; Provisional), RVT-GII, InsE (COG2963), GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed), Intron_maturas2 (pfam01348), HNHc (smart00507), PRK13732 (single-stranded DNA-binding protein; Provisional), DUF905 (pfam06006)

Seq: SEVQ01000001.1 (5219967 bp)
Overview 1 RT 1: 415477-420375 bp 2 RT 2: 1076259-1079817 bp Neighborhood of RT #1 [415477, 420375] RVT-Retrons Neighborhood of RT #2 [1076259, 1080188] SLATT_5 RVT-UG17 Caudo_TAP Macro_Appr_pase Feature: gene Location: 415477-415707 bp Feature: gene Location: 415922-416161 bp Feature: gene Location: 416732-418489 bp Ori: TLI13001.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 416876-417494 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 416876-417494 bp Feature: gene Location: 418736-419863 bp Feature: gene Location: 419860-420375 bp Feature: gene Location: 1076259-1076436 bp Feature: gene Location: 1076681-1077232 bp Ori: TLI13592.1 Feature: domain Description: SLATT_5 Location: 1076690-1077203 bp Feature: domain Description: SLATT_5 Location: 1076690-10772 03 bp Feature: gene Location: 1077210-1078580 bp Ori: TLI13593.1 Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 1077438-1078044 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 1077438-1078044 bp Feature: gene Location: 1078693-1079277 bp Ori: TLI13594.1 Feature: domain Description: Caudo_TAP Location: 1078909-1079266 bp Feature: domain Description: Caudo_TAP Location: 1078909-10792 66 bp Feature: gene Location: 1079286-1080188 bp Ori: TLI13595.1 Feature: domain Description: Macro_Appr_pase Location: 1079304-1079817 bp Feature: domain Description: Macro_Appr_pase Location: 1079304-1079817 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, SLATT_5 (pfam18160), RVT-UG17, Caudo_TAP (pfam02413), Macro_Appr_pase (cd02900)