myRT

myRT report for GCA_005671015.1_ASM567101v1

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Seq: SEVS01000012.1 (300339 bp)
Overview 1 RT 1: 33241-37170 bp Neighborhood of RT #1 [33241, 37170] Macro_Appr_pase Caudo_TAP RVT-UG17 SLATT_5 Feature: gene Location: 33241-34143 bp Ori: TLI17512.1 Feature: domain Description: Macro_Appr_pase Location: 33259-33772 bp Feature: domain Description: Macro_Appr_pase Location: 33259-33772 bp Feature: gene Location: 34152-34736 bp Ori: TLI17513.1 Feature: domain Description: Caudo_TAP Location: 34368-34725 bp Feature: domain Description: Caudo_TAP Location: 34368-34725 bp Feature: gene Location: 34849-36219 bp Ori: TLI17514.1 Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 35077-35683 bp Feature: RT Description: RVT-UG1 7 Note: UG1 7 RT Location: 35077-35683 bp Feature: gene Location: 36197-36748 bp Ori: TLI17515.1 Feature: domain Description: SLATT_5 Location: 36206-36719 bp Feature: domain Description: SLATT_5 Location: 36206-3671 9 bp Feature: gene Location: 36993-37170 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Macro_Appr_pase (cd02900), Caudo_TAP (pfam02413), RVT-UG17, SLATT_5 (pfam18160)

Seq: SEVS01000006.1 (4527727 bp)
Overview 1 RT 1: 18435-23333 bp Neighborhood of RT #1 [18435, 23333] RVT-Retrons Feature: gene Location: 18435-18950 bp Feature: gene Location: 18947-20074 bp Feature: gene Location: 20321-22078 bp Ori: TLI21631.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 20465-21083 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2 0465-2 1083 bp Feature: gene Location: 22649-22888 bp Feature: gene Location: 23103-23333 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons

Seq: SEVS01000003.1 (136497 bp)
Overview 1 RT 1: 1-2216 bp 2 RT 2: 119991-123724 bp Neighborhood of RT #1 [1, 2216] RVT-GII Neighborhood of RT #2 [119991, 123724] DUF905 PRK13732 RVT-GII Intron_maturas2 HNHc Feature: gene Location: 1-1034 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 730-967 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 73 0-967 bp Feature: gene Location: 1839-2027 bp Feature: gene Location: 2029-2216 bp Feature: gene Location: 119991-120224 bp Ori: TLI30766.1 Feature: domain Description: DUF905 Location: 120021-120219 bp Feature: domain Description: DUF905 Location: 120021-120219 bp Feature: gene Location: 120292-120789 bp Ori: TLI30767.1 Gene: ssb Feature: domain Description: PRK13732 Location: 120295-120787 bp Feature: domain Description: PRK13 73 2 Location: 120295-120787 bp Feature: gene Location: 120939-122840 bp Ori: TLI30768.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 121206-122037 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 121206-12203 7 bp Feature: domain Description: Intron_maturas2 Location: 122151-122409 bp Feature: domain Description: Intron_maturas2 Location: 122151-122409 bp Feature: domain Description: HNHc Note: nucleases Location: 122583-122745 bp Feature: domain Description: HNHc Note: nucleases Location: 122583 -122745 bp Feature: gene Location: 123454-123531 bp Feature: gene Location: 123518-123724 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, DUF905 (pfam06006), PRK13732 (single-stranded DNA-binding protein; Provisional), Intron_maturas2 (pfam01348), HNHc (smart00507)