myRT

myRT report for GCA_005772675.1_ASM577267v1

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Seq: SXJB01000173.1 (9222 bp)
Overview 1 RT 1: 3431-6348 bp Neighborhood of RT #1 [3431, 6348] DUF4096 COG3293 RVT-UG18 Feature: gene Location: 3431-3703 bp Feature: domain Description: DUF4096 Location: 3452-3656 bp Feature: domain Description: DUF4096 Location: 3452-3656 bp Feature: gene Location: 3696-4175 bp Feature: domain Description: COG3293 Location: 3798-4167 bp Feature: domain Description: COG3293 Location: 3798-41 67 bp Feature: gene Location: 4698-5159 bp Feature: RT Description: RVT-UG18 Note: UG18 RT Location: 4701-5019 bp Feature: RT Description: RVT-UG1 8 Note: UG1 8 RT Location: 4701 -501 9 bp Feature: gene Location: 5215-5415 bp Feature: gene Location: 5467-6348 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF4096 (pfam13340), COG3293 (Transposase ), RVT-UG18

Seq: SXJB01000076.1 (4635 bp)
Overview 1 RT 1: 336-3972 bp Neighborhood of RT #1 [336, 4136] RVT-GII SPOR type_II_gspD type_II_gspD Feature: gene Location: 336-503 bp Feature: gene Location: 598-1014 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 913-1003 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 913-1003 bp Feature: gene Location: 1544-1735 bp Feature: gene Location: 1803-4136 bp Feature: domain Description: SPOR Location: 1899-2085 bp Feature: domain Description: SPOR Location: 1899-2 085 bp Feature: domain Description: type_II_gspD Location: 2169-3357 bp Feature: domain Description: type_II_gspD Location: 2 169-3357 bp Feature: domain Description: type_II_gspD Location: 3396-3972 bp Feature: domain Description: type_II_gspD Location: 3396-3972 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, SPOR (pfam05036), type_II_gspD (TIGR02517)

Seq: SXJB01000018.1 (5178 bp)
Overview 1 RT 1: 1239-4779 bp Neighborhood of RT #1 [1239, 5060] lolCE DUF772 IS5 RVT-DGRs Feature: gene Location: 1239-2483 bp Feature: domain Description: lolCE Location: 1251-2481 bp Feature: domain Description: lolCE Location: 1251-2481 bp Feature: gene Location: 2719-4182 bp Feature: domain Description: DUF772 Location: 2902-3097 bp Feature: domain Description: DUF772 Location: 2902-3 097 bp Feature: domain Description: IS5 Location: 3781-3892 bp Feature: domain Description: IS5 Location: 3 781-3 892 bp Feature: gene Location: 4209-5060 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 4236-4779 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 423 6-4779 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT lolCE (TIGR02212), DUF772 (pfam05598), IS5 (COG3039), RVT-DGRs