myRT

myRT report for GCA_005772825.1_ASM577282v1

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Seq: SXIP01000050.1 Methylococcaceae bacterium isolate F1-120-MAGs053 F1-120__c189558, whole genome shotgun sequence (12099 bp)
Overview 1 RT 1: 1740-4650 bp Neighborhood of RT #1 [1740, 4676] DUF4255 RVT-GII UPF0175 COG2405 Feature: gene Location: 1740-2759 bp Feature: gene Location: 2756-3391 bp Feature: domain Description: DUF4255 Location: 2903-3344 bp Feature: domain Description: DUF4255 Location: 2903-3344 bp Feature: gene Location: 3550-3786 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3646-3745 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3646-3745 bp Feature: gene Location: 3955-4206 bp Feature: domain Description: UPF0175 Location: 4024-4129 bp Feature: domain Description: UPF01 75 Location: 4024-41 29 bp Feature: gene Location: 4203-4676 bp Feature: domain Description: COG2405 Location: 4212-4650 bp Feature: domain Description: COG2405 Location: 421 2-4650 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF4255 (pfam14065), RVT-GII, UPF0175 (pfam03683), COG2405 (Predicted nucleic acid-binding protein, contains PIN domain )

Seq: SXIP01000235.1 Methylococcaceae bacterium isolate F1-120-MAGs053 F1-120__c749583, whole genome shotgun sequence (16322 bp)
Overview 1 RT 1: 10906-16156 bp Neighborhood of RT #1 [10906, 16197] AAA_26 RVT-GII FecR TPR TPR TPR Feature: gene Location: 10906-12081 bp Feature: gene Location: 12354-13064 bp Feature: domain Description: AAA_26 Location: 12372-12963 bp Feature: domain Description: AAA_2 6 Location: 12 372 -12 963 bp Feature: gene Location: 13531-14451 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13888-14362 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13888-14362 bp Feature: gene Location: 14689-16197 bp Feature: domain Description: FecR Location: 14890-15163 bp Feature: domain Description: FecR Location: 14890-15163 bp Feature: domain Description: TPR Location: 15442-15607 bp Feature: domain Description: TPR Location: 15442 -15607 bp Feature: domain Description: TPR Location: 15676-15916 bp Feature: domain Description: TPR Location: 15676-15916 bp Feature: domain Description: TPR Location: 15952-16156 bp Feature: domain Description: TPR Location: 15952 -16156 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AAA_26 (pfam13500), RVT-GII, FecR (pfam04773), TPR (smart00028)

Seq: SXIP01000278.1 Methylococcaceae bacterium isolate F1-120-MAGs053 F1-120__c905753, whole genome shotgun sequence (14144 bp)
Overview 1 RT 1: 12489-13374 bp Neighborhood of RT #1 [12489, 14006] RVT-UG28b Feature: gene Location: 12489-12731 bp Feature: gene Location: 12900-13100 bp Feature: gene Location: 13185-14006 bp Feature: RT Description: RVT-UG28b Note: UG28b RT Location: 13191-13374 bp Feature: RT Description: RVT-UG28b Note: UG28b RT Location: 13 191-13 3 74 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG28b

Seq: SXIP01000275.1 Methylococcaceae bacterium isolate F1-120-MAGs053 F1-120__c897621, whole genome shotgun sequence (7664 bp)
Overview 1 RT 1: 131-3341 bp Neighborhood of RT #1 [131, 3388] RVT-UG28b Glyco_tranf_GTA_type GT4_PimA-like Feature: gene Location: 131-1162 bp Feature: RT Description: RVT-UG28b Note: UG28b RT Location: 629-1154 bp Feature: RT Description: RVT-UG28b Note: UG28b RT Location: 629-1154 bp Feature: gene Location: 1305-2306 bp Feature: domain Description: Glyco_tranf_GTA_type Location: 1329-1854 bp Feature: domain Description: Glyco_tranf_GTA_type Location: 1329-1854 bp Feature: gene Location: 2303-3388 bp Feature: domain Description: GT4_PimA-like Location: 2333-3341 bp Feature: domain Description: GT4 _PimA-like Location: 2333-334 1 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG28b, Glyco_tranf_GTA_type (cl11394), GT4_PimA-like (cd03801)