myRT

myRT report for GCA_005773195.1_ASM577319v1

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Seq: SXHJ01000513.1 (4041 bp)
Overview 1 RT 1: 3-3854 bp Neighborhood of RT #1 [3, 4039] CRISPR_Cas6 RVT-CRISPR Cas1_I-II-III Cmr1 Cmr1 Feature: gene Location: 3-2816 bp Feature: domain Description: CRISPR_Cas6 Location: 534-888 bp Feature: domain Description: CRISPR_Cas6 Location: 534-888 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 1080-1644 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 1 080-1 644 bp Feature: domain Description: Cas1_I-II-III Location: 1860-2772 bp Feature: domain Description: Cas1 _I-II-III Location: 1 860-2772 bp Feature: gene Location: 2859-3167 bp Feature: gene Location: 3272-4039 bp Feature: domain Description: Cmr1 Location: 3290-3512 bp Feature: domain Description: Cmr1 Location: 3290-351 2 bp Feature: domain Description: Cmr1 Location: 3755-3854 bp Feature: domain Description: Cmr1 Location: 3755-3854 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT CRISPR_Cas6 (pfam10040), RVT-CRISPR, Cas1_I-II-III (cl00656), Cmr1 (COG1367)

Seq: SXHJ01000542.1 (8274 bp)
Overview 1 RT 1: 4441-8187 bp Neighborhood of RT #1 [4441, 8273] DUF1501 DUF1501 RVT-CRISPR-like GIIM Feature: gene Location: 4441-5886 bp Feature: domain Description: DUF1501 Location: 4630-5878 bp Feature: domain Description: DUF1501 Location: 4630-5878 bp Feature: gene Location: 5911-7437 bp Feature: domain Description: DUF1501 Location: 6217-7432 bp Feature: domain Description: DUF1501 Location: 62 17-7432 bp Feature: gene Location: 7620-8273 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 7656-7908 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 7656-7908 bp Feature: domain Description: GIIM Note: maturase Location: 7959-8187 bp Feature: domain Description: GIIM Note: maturase Location: 7959-8187 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF1501 (pfam07394), RVT-CRISPR, GIIM (pfam08388)

Seq: SXHJ01000177.1 (2683 bp)
Overview 1 RT 1: 22-2680 bp Neighborhood of RT #1 [22, 2680] sulfatase_like RVT-Retrons Feature: gene Location: 22-477 bp Feature: domain Description: sulfatase_like Location: 25-451 bp Feature: domain Description: sulfatase_like Location: 25-451 bp Feature: gene Location: 867-2315 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1437-2070 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 143 7-2070 bp Feature: gene Location: 2447-2680 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT sulfatase_like (cd16156), RVT-Retrons

Seq: SXHJ01000008.1 (6280 bp)
Overview 1 RT 1: 1879-5734 bp Neighborhood of RT #1 [1879, 5734] RVT-GII Feature: gene Location: 1879-3504 bp Feature: gene Location: 3534-3671 bp Feature: gene Location: 3926-4366 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3932-4211 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3932-4 211 bp Feature: gene Location: 4396-4530 bp Feature: gene Location: 4748-5734 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII