myRT

myRT report for GCA_005777485.1_ASM577748v1

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Seq: SXMC01000414.1 (110002 bp)
Overview 1 RT 1: 71870-78164 bp Neighborhood of RT #1 [71870, 78169] KOG3704 Methyltransf_25 PRK00566 RVT-UNC CspC Feature: gene Location: 71870-72673 bp Feature: domain Description: KOG3704 Location: 71888-72413 bp Feature: domain Description: KOG3704 Location: 71 888-7241 3 bp Feature: gene Location: 72962-73711 bp Feature: domain Description: Methyltransf_25 Location: 73106-73373 bp Feature: domain Description: Methyltransf_25 Location: 731 06-73373 bp Feature: gene Location: 73795-76281 bp Feature: domain Description: PRK00566 Location: 74815-74908 bp Feature: domain Description: PRK00566 Location: 7481 5-74908 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 75037-75466 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 75037-75466 bp Feature: gene Location: 76330-77556 bp Feature: gene Location: 77966-78169 bp Feature: domain Description: CspC Location: 77969-78164 bp Feature: domain Description: CspC Location: 77969-781 64 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT KOG3704 (KOG3704, Heparan sulfate D-glucosaminyl 3-O-sulfotransferase ), Methyltransf_25 (pfam13649), PRK00566 (DNA-directed RNA polymerase subunit beta'; Provisional), RVT-UG11/RVT-DGRs/RVT-CRISPR(RVT-UNC), CspC (COG1278)

Seq: SXMC01000371.1 (13410 bp)
Overview 1 RT 1: 847-5969 bp Neighborhood of RT #1 [847, 5969] Palm_thioest AcrR RVT-Retrons RsmC Feature: gene Location: 847-1974 bp Feature: domain Description: Palm_thioest Location: 1198-1366 bp Feature: domain Description: Palm_thioest Location: 1198-1366 bp Feature: gene Location: 2006-2614 bp Feature: domain Description: AcrR Location: 2021-2573 bp Feature: domain Description: AcrR Location: 2 02 1-2 573 bp Feature: gene Location: 2746-4239 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3376-4000 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3376-4000 bp Feature: gene Location: 4432-5448 bp Feature: domain Description: RsmC Location: 4642-5422 bp Feature: domain Description: RsmC Location: 4642 -542 2 bp Feature: gene Location: 5589-5969 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Palm_thioest (pfam02089), AcrR (COG1309), RVT-Retrons, RsmC (COG2813)

Seq: SXMC01000221.1 (91787 bp)
Overview 1 RT 1: 57429-65461 bp Neighborhood of RT #1 [57429, 65478] WGR_DNA_ligase HEAT_2 RVT-Retrons Cpn10 MobA Feature: gene Location: 57429-60770 bp Feature: domain Description: WGR_DNA_ligase Location: 57447-57666 bp Feature: domain Description: WGR_DNA_ligase Location: 57447-57666 bp Feature: domain Description: HEAT_2 Location: 58014-58221 bp Feature: domain Description: HEAT_2 Location: 58014-58221 bp Feature: gene Location: 60833-62422 bp Feature: gene Location: 62707-64359 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 63274-63892 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 63 274-63 892 bp Feature: gene Location: 64475-64825 bp Feature: domain Description: Cpn10 Location: 64514-64793 bp Feature: domain Description: Cpn10 Location: 64514-64793 bp Feature: gene Location: 64843-65478 bp Feature: domain Description: MobA Location: 64849-65461 bp Feature: domain Description: MobA Location: 64849-65461 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT WGR_DNA_ligase (cd07998), HEAT_2 (pfam13646), RVT-Retrons, Cpn10 (smart00883), MobA (COG0746)