myRT

myRT report for GCA_005779485.1_ASM577948v1

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Seq: SXJE01000142.1 Opitutaceae bacterium isolate F1-120-MAGs071 F1-120__c274220, whole genome shotgun sequence (26061 bp)
Overview 1 RT 1: 20722-26058 bp Neighborhood of RT #1 [20722, 26058] CarboxypepD_reg TonB-Xanth-Caul RVT-GII Feature: gene Location: 20722-24159 bp Feature: domain Description: CarboxypepD_reg Location: 21112-21340 bp Feature: domain Description: CarboxypepD_reg Location: 21 1 1 2-21 340 bp Feature: domain Description: TonB-Xanth-Caul Location: 21427-24157 bp Feature: domain Description: TonB-Xanth-Caul Location: 21 427-241 57 bp Feature: gene Location: 24410-24805 bp Feature: gene Location: 25158-25592 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 25170-25473 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 251 70-25473 bp Feature: gene Location: 25708-26058 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT CarboxypepD_reg (pfam13620), TonB-Xanth-Caul (TIGR01782), RVT-GII

Seq: SXJE01000159.1 Opitutaceae bacterium isolate F1-120-MAGs071 F1-120__c297329, whole genome shotgun sequence (51321 bp)
Overview 1 RT 1: 2597-8329 bp Neighborhood of RT #1 [2597, 8329] COG5316 UvrD RVT-GII PRK08137 Feature: gene Location: 2597-4048 bp Feature: domain Description: COG5316 Location: 2663-4043 bp Feature: domain Description: COG5316 Location: 2 663-4043 bp Feature: gene Location: 4503-6506 bp Feature: domain Description: UvrD Location: 4569-6474 bp Feature: domain Description: UvrD Location: 4569-6474 bp Feature: gene Location: 7100-7687 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7175-7481 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7175-7481 bp Feature: gene Location: 7646-7906 bp Feature: domain Description: PRK08137 Location: 7661-7892 bp Feature: domain Description: PRK08137 Location: 7661-7892 bp Feature: gene Location: 7985-8329 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG5316 (Uncharacterized protein ), UvrD (COG0210), RVT-GII, PRK08137 (amidase; Provisional)

Seq: SXJE01000168.1 Opitutaceae bacterium isolate F1-120-MAGs071 F1-120__c312904, whole genome shotgun sequence (9785 bp)
Overview 1 RT 1: 81-3525 bp Neighborhood of RT #1 [81, 3743] Ser_Recombinase RVT-GII GIIM Methyltransf_12 CytB CytB Feature: gene Location: 81-416 bp Feature: domain Description: Ser_Recombinase Location: 135-354 bp Feature: domain Description: Ser_Recombinase Location: 13 5-3 54 bp Feature: gene Location: 491-829 bp Feature: gene Location: 697-1761 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 919-1378 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 919-13 78 bp Feature: domain Description: GIIM Note: maturase Location: 1450-1645 bp Feature: domain Description: GIIM Note: maturase Location: 1450-1645 bp Feature: gene Location: 1863-2912 bp Feature: domain Description: Methyltransf_12 Location: 1875-2163 bp Feature: domain Description: Methyltransf_12 Location: 1875-2163 bp Feature: gene Location: 3141-3743 bp Feature: domain Description: CytB Location: 3153-3375 bp Feature: domain Description: CytB Location: 3 153 -3 3 75 bp Feature: domain Description: CytB Location: 3393-3525 bp Feature: domain Description: CytB Location: 3 3 93 -3 525 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Methyltransf_12 (pfam08242), CytB (COG3658), RVT-GII, GIIM (pfam08388), Ser_Recombinase (cl02788)