myRT

myRT report for GCA_005790835.1_ASM579083v1

Download annotations/find similar RTs

Seq: SXTS01000001.1 (11274 bp)
Overview 1 RT 1: 1-1672 bp Neighborhood of RT #1 [1, 1672] RVT-UG18 Feature: gene Location: 1-483 bp Feature: RT Description: RVT-UG18 Note: UG18 RT Location: 7-343 bp Feature: RT Description: RVT-UG1 8 Note: UG1 8 RT Location: 7-343 bp Feature: gene Location: 539-739 bp Feature: gene Location: 791-1672 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG18

Seq: SXTS01000015.1 (6293 bp)
Overview 1 RT 1: 2354-5894 bp Neighborhood of RT #1 [2354, 6175] lolCE DUF772 IS5 RVT-DGRs Feature: gene Location: 2354-3598 bp Feature: domain Description: lolCE Location: 2366-3596 bp Feature: domain Description: lolCE Location: 2 366-3596 bp Feature: gene Location: 3834-5297 bp Feature: domain Description: DUF772 Location: 4017-4212 bp Feature: domain Description: DUF772 Location: 4017-42 12 bp Feature: domain Description: IS5 Location: 4896-5007 bp Feature: domain Description: IS5 Location: 4896-5007 bp Feature: gene Location: 5324-6175 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 5351-5894 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 5351-5894 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT lolCE (TIGR02212), DUF772 (pfam05598), IS5 (COG3039), RVT-DGRs

Seq: SXTS01000066.1 (4246 bp)
Overview 1 RT 1: 176-3982 bp Neighborhood of RT #1 [176, 4104] RVT-GII GIIM rve_3 TraA_Ti Feature: gene Location: 176-1438 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 380-1037 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 80-103 7 bp Feature: domain Description: GIIM Note: maturase Location: 1124-1337 bp Feature: domain Description: GIIM Note: maturase Location: 1124-13 3 7 bp Feature: gene Location: 1682-1930 bp Feature: domain Description: rve_3 Location: 1697-1895 bp Feature: domain Description: rve_3 Location: 1697-1895 bp Feature: gene Location: 2098-4104 bp Feature: domain Description: TraA_Ti Location: 2116-3982 bp Feature: domain Description: TraA_Ti Location: 2116-3 982 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), rve_3 (pfam13683), TraA_Ti (TIGR02768)