myRT

myRT report for GCA_005792355.1_ASM579235v1

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Seq: SXSC01000168.1 Opitutaceae bacterium isolate F1-140-MAGs074 F1-140__c221448, whole genome shotgun sequence (25723 bp)
Overview 1 RT 1: 20732-25483 bp Neighborhood of RT #1 [20732, 25602] CarboxypepD_reg TonB-Xanth-Caul RVT-GII Feature: gene Location: 20732-24169 bp Feature: domain Description: CarboxypepD_reg Location: 21122-21350 bp Feature: domain Description: CarboxypepD_reg Location: 21 1 22-21 350 bp Feature: domain Description: TonB-Xanth-Caul Location: 21437-24167 bp Feature: domain Description: TonB-Xanth-Caul Location: 21 437-241 67 bp Feature: gene Location: 24420-24815 bp Feature: gene Location: 25168-25602 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 25180-25483 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 251 80-25483 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT CarboxypepD_reg (pfam13620), TonB-Xanth-Caul (TIGR01782), RVT-GII

Seq: SXSC01000263.1 Opitutaceae bacterium isolate F1-140-MAGs074 F1-140__c358561, whole genome shotgun sequence (52039 bp)
Overview 1 RT 1: 3315-9047 bp Neighborhood of RT #1 [3315, 9047] COG5316 UvrD RVT-GII PRK08137 Feature: gene Location: 3315-4766 bp Feature: domain Description: COG5316 Location: 3381-4761 bp Feature: domain Description: COG5316 Location: 3381-4761 bp Feature: gene Location: 5221-7224 bp Feature: domain Description: UvrD Location: 5287-7192 bp Feature: domain Description: UvrD Location: 52 87-7192 bp Feature: gene Location: 7818-8405 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7893-8199 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7893-8199 bp Feature: gene Location: 8364-8624 bp Feature: domain Description: PRK08137 Location: 8379-8610 bp Feature: domain Description: PRK08137 Location: 8379-8610 bp Feature: gene Location: 8703-9047 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG5316 (Uncharacterized protein ), UvrD (COG0210), RVT-GII, PRK08137 (amidase; Provisional)

Seq: SXSC01000404.1 Opitutaceae bacterium isolate F1-140-MAGs074 F1-140__c567253, whole genome shotgun sequence (9785 bp)
Overview 1 RT 1: 81-3525 bp Neighborhood of RT #1 [81, 3743] Ser_Recombinase RVT-GII GIIM Methyltransf_12 CytB CytB Feature: gene Location: 81-416 bp Feature: domain Description: Ser_Recombinase Location: 135-354 bp Feature: domain Description: Ser_Recombinase Location: 13 5-3 54 bp Feature: gene Location: 491-829 bp Feature: gene Location: 697-1761 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 919-1378 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 919-13 78 bp Feature: domain Description: GIIM Note: maturase Location: 1450-1645 bp Feature: domain Description: GIIM Note: maturase Location: 1450-1645 bp Feature: gene Location: 1863-2912 bp Feature: domain Description: Methyltransf_12 Location: 1875-2163 bp Feature: domain Description: Methyltransf_12 Location: 1875-2163 bp Feature: gene Location: 3141-3743 bp Feature: domain Description: CytB Location: 3153-3375 bp Feature: domain Description: CytB Location: 3 153 -3 3 75 bp Feature: domain Description: CytB Location: 3393-3525 bp Feature: domain Description: CytB Location: 3 3 93 -3 525 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Methyltransf_12 (pfam08242), CytB (COG3658), RVT-GII, GIIM (pfam08388), Ser_Recombinase (cl02788)