myRT

myRT report for GCA_005795905.1_ASM579590v1

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Seq: VAWE01000001.1 (8395906 bp)
Overview 1 RT 1: 68879-72157 bp 2 RT 2: 187235-194332 bp 3 RT 3: 1349260-1357537 bp 4 RT 4: 3819335-3825258 bp 5 RT 5: 7439047-7447201 bp 6 RT 6: 7577133-7580817 bp 7 RT 7: 8320677-8327718 bp 8 RT 8: 8359274-8363662 bp Neighborhood of RT #1 [68879, 72177] AAA_33 PRK09183 RVT-GII GIIM DUF4096 DDE_Tnp_1_2 Neighborhood of RT #2 [187235, 194340] DUF4394 GGDEF_2 HTH_30 RVT-GII GIIM DDE_5 PGDH fabG Neighborhood of RT #3 [1349260, 1357611] MFS_Azr1_MDR_like CarboxypepD_reg CarboxypepD_reg CarboxypepD_reg Polyketide_cyc2 RVT-GII Intron_maturas2 HNHc DDE_Tnp_1_assoc YhhI YhhI Cupin_2 Neighborhood of RT #4 [3819335, 3825258] zf-ISL3 HTH_Tnp_ISL3 DDE_Tnp_ISL3 RVT-GII GIIM DUF772 DDE_Tnp_1_6 Neighborhood of RT #5 [7439047, 7447245] DUF772 IS5 DDE_Tnp_1_6 DDE_Tnp_1_assoc DDE_Tnp_1 RVT-GII GIIM zf-ISL3 HTH_Tnp_ISL3 DDE_Tnp_ISL3 DDE_5 Neighborhood of RT #6 [7577133, 7580855] AcrR COG4188 RVT-GII GIIM DUF772 Neighborhood of RT #7 [8320677, 8327786] zf-ISL3 HTH_Tnp_ISL3 RVT-GII GIIM COG5421 COG5421 GT4_PimA-like Neighborhood of RT #8 [8359274, 8363898] COG3293 COG3293 RVT-GII AdoMet_MTases Feature: gene Location: 68879-69430 bp Feature: domain Description: AAA_33 Location: 68894-69278 bp Feature: domain Description: AAA_33 Location: 68894-69278 bp Feature: gene Location: 69445-69612 bp Feature: domain Description: PRK09183 Location: 69448-69592 bp Feature: domain Description: PRK091 83 Location: 69448-69592 bp Feature: gene Location: 69756-71054 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 70029-70668 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 70029-70668 bp Feature: domain Description: GIIM Note: maturase Location: 70749-70971 bp Feature: domain Description: GIIM Note: maturase Location: 70749-70971 bp Feature: gene Location: 71180-71596 bp Feature: domain Description: DUF4096 Location: 71198-71408 bp Feature: domain Description: DUF4096 Location: 71 1 98-71 408 bp Feature: gene Location: 71614-72177 bp Feature: domain Description: DDE_Tnp_1_2 Location: 71869-72157 bp Feature: domain Description: DDE_Tnp_1 _2 Location: 71 869-721 57 bp Feature: gene Location: 187235-188122 bp Feature: domain Description: DUF4394 Location: 187403-188102 bp Feature: domain Description: DUF4394 Location: 1 87403-1 881 02 bp Feature: gene Location: 188440-189696 bp Feature: domain Description: GGDEF_2 Location: 188962-189346 bp Feature: domain Description: GGDEF_2 Location: 1 88962-1 89346 bp Feature: domain Description: HTH_30 Location: 189499-189658 bp Feature: domain Description: HTH_30 Location: 1 89499-1 89658 bp Feature: gene Location: 190126-191490 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 190465-191104 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 90465-1 91 1 04 bp Feature: domain Description: GIIM Note: maturase Location: 191185-191407 bp Feature: domain Description: GIIM Note: maturase Location: 1 91 1 85-1 91 407 bp Feature: gene Location: 192199-193647 bp Feature: domain Description: DDE_5 Location: 192265-193060 bp Feature: domain Description: DDE_5 Location: 1 92265-1 93060 bp Feature: gene Location: 194029-194340 bp Feature: domain Description: PGDH Location: 194032-194158 bp Feature: domain Description: PGDH Location: 1 94032-1 941 58 bp Feature: domain Description: fabG Location: 194245-194332 bp Feature: domain Description: fabG Location: 1 94245-1 94332 bp Feature: gene Location: 1349260-1351680 bp Feature: domain Description: MFS_Azr1_MDR_like Location: 1349392-1350805 bp Feature: domain Description: MFS_Azr1 _MDR_like Location: 1 349392-1 350805 bp Feature: domain Description: CarboxypepD_reg Location: 1350934-1351159 bp Feature: domain Description: CarboxypepD_reg Location: 1 350934-1 351 1 59 bp Feature: domain Description: CarboxypepD_reg Location: 1351177-1351411 bp Feature: domain Description: CarboxypepD_reg Location: 1 351 1 77-1 351 41 1 bp Feature: domain Description: CarboxypepD_reg Location: 1351429-1351657 bp Feature: domain Description: CarboxypepD_reg Location: 1 351 429-1 351 657 bp Feature: gene Location: 1352060-1352503 bp Feature: domain Description: Polyketide_cyc2 Location: 1352072-1352495 bp Feature: domain Description: Polyketide_cyc2 Location: 1 352072-1 352495 bp Feature: gene Location: 1352800-1354629 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1353064-1353862 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 353064-1 353862 bp Feature: domain Description: Intron_maturas2 Location: 1353961-1354198 bp Feature: domain Description: Intron_maturas2 Location: 1 353961 -1 3541 98 bp Feature: domain Description: HNHc Note: nucleases Location: 1354399-1354558 bp Feature: domain Description: HNHc Note: nucleases Location: 1 354399-1 354558 bp Feature: gene Location: 1355284-1356408 bp Feature: domain Description: DDE_Tnp_1_assoc Location: 1355350-1355608 bp Feature: domain Description: DDE_Tnp_1 _assoc Location: 1 355350-1 355608 bp Feature: domain Description: YhhI Location: 1355746-1355938 bp Feature: domain Description: YhhI Location: 1 355746-1 355938 bp Feature: domain Description: YhhI Location: 1356187-1356322 bp Feature: domain Description: YhhI Location: 1 3561 87-1 356322 bp Feature: gene Location: 1357237-1357611 bp Feature: domain Description: Cupin_2 Location: 1357348-1357537 bp Feature: domain Description: Cupin_2 Location: 1 357348-1 357537 bp Feature: gene Location: 3819335-3819583 bp Feature: gene Location: 3819725-3821035 bp Feature: domain Description: zf-ISL3 Location: 3819842-3819971 bp Feature: domain Description: zf-ISL3 Location: 381 9842-381 9971 bp Feature: domain Description: HTH_Tnp_ISL3 Location: 3820001-3820151 bp Feature: domain Description: HTH_Tnp_ISL3 Location: 3820001 -38201 51 bp Feature: domain Description: DDE_Tnp_ISL3 Location: 3820271-3820988 bp Feature: domain Description: DDE_Tnp_ISL3 Location: 3820271 -3820988 bp Feature: gene Location: 3821144-3822610 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3821483-3822179 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3821 483-38221 79 bp Feature: domain Description: GIIM Note: maturase Location: 3822248-3822470 bp Feature: domain Description: GIIM Note: maturase Location: 3822248-3822470 bp Feature: gene Location: 3823110-3824873 bp Feature: domain Description: DUF772 Location: 3823320-3823527 bp Feature: domain Description: DUF772 Location: 3823320-3823527 bp Feature: domain Description: DDE_Tnp_1_6 Location: 3824427-3824793 bp Feature: domain Description: DDE_Tnp_1 _6 Location: 3824427-3824793 bp Feature: gene Location: 3825094-3825258 bp Feature: gene Location: 7439047-7440720 bp Feature: domain Description: DUF772 Location: 7439119-7439338 bp Feature: domain Description: DUF772 Location: 74391 1 9-7439338 bp Feature: domain Description: IS5 Location: 7439809-7440163 bp Feature: domain Description: IS5 Location: 7439809-74401 63 bp Feature: domain Description: DDE_Tnp_1_6 Location: 7440274-7440640 bp Feature: domain Description: DDE_Tnp_1 _6 Location: 7440274-7440640 bp Feature: gene Location: 7440786-7442045 bp Feature: domain Description: DDE_Tnp_1_assoc Location: 7440861-7441131 bp Feature: domain Description: DDE_Tnp_1 _assoc Location: 7440861 -7441 1 31 bp Feature: domain Description: DDE_Tnp_1 Location: 7441263-7441914 bp Feature: domain Description: DDE_Tnp_1 Location: 7441 263-7441 91 4 bp Feature: gene Location: 7443849-7445279 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7444188-7444884 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 74441 88-7444884 bp Feature: domain Description: GIIM Note: maturase Location: 7444953-7445175 bp Feature: domain Description: GIIM Note: maturase Location: 7444953-74451 75 bp Feature: gene Location: 7445569-7446771 bp Feature: domain Description: zf-ISL3 Location: 7445686-7445815 bp Feature: domain Description: zf-ISL3 Location: 7445686-744581 5 bp Feature: domain Description: HTH_Tnp_ISL3 Location: 7445851-7445992 bp Feature: domain Description: HTH_Tnp_ISL3 Location: 7445851 -7445992 bp Feature: domain Description: DDE_Tnp_ISL3 Location: 7446124-7446574 bp Feature: domain Description: DDE_Tnp_ISL3 Location: 74461 24-7446574 bp Feature: gene Location: 7446898-7447245 bp Feature: domain Description: DDE_5 Location: 7447021-7447201 bp Feature: domain Description: DDE_5 Location: 7447021 -7447201 bp Feature: gene Location: 7577133-7577714 bp Feature: domain Description: AcrR Location: 7577169-7577643 bp Feature: domain Description: AcrR Location: 75771 69-7577643 bp Feature: gene Location: 7577871-7578830 bp Feature: domain Description: COG4188 Location: 7577931-7578348 bp Feature: domain Description: COG41 88 Location: 7577931 -7578348 bp Feature: gene Location: 7579421-7580167 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7579427-7579721 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7579427-7579721 bp Feature: domain Description: GIIM Note: maturase Location: 7579790-7580027 bp Feature: domain Description: GIIM Note: maturase Location: 7579790-7580027 bp Feature: gene Location: 7580223-7580423 bp Feature: gene Location: 7580472-7580855 bp Feature: domain Description: DUF772 Location: 7580631-7580817 bp Feature: domain Description: DUF772 Location: 7580631 -758081 7 bp Feature: gene Location: 8320677-8321192 bp Feature: gene Location: 8321427-8322122 bp Feature: domain Description: zf-ISL3 Location: 8321544-8321673 bp Feature: domain Description: zf-ISL3 Location: 8321 544-8321 673 bp Feature: domain Description: HTH_Tnp_ISL3 Location: 8321703-8321856 bp Feature: domain Description: HTH_Tnp_ISL3 Location: 8321 703-8321 856 bp Feature: gene Location: 8322371-8323837 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8322710-8323406 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 832271 0-8323406 bp Feature: domain Description: GIIM Note: maturase Location: 8323475-8323697 bp Feature: domain Description: GIIM Note: maturase Location: 8323475-8323697 bp Feature: gene Location: 8324016-8325743 bp Feature: domain Description: COG5421 Location: 8324709-8324997 bp Feature: domain Description: COG5421 Location: 8324709-8324997 bp Feature: domain Description: COG5421 Location: 8325342-8325555 bp Feature: domain Description: COG5421 Location: 8325342-8325555 bp Feature: gene Location: 8326743-8327786 bp Feature: domain Description: GT4_PimA-like Location: 8327001-8327718 bp Feature: domain Description: GT4_PimA-like Location: 8327001 -832771 8 bp Feature: gene Location: 8359274-8359825 bp Feature: gene Location: 8359830-8360801 bp Feature: domain Description: COG3293 Location: 8360007-8360349 bp Feature: domain Description: COG3293 Location: 8360007-8360349 bp Feature: domain Description: COG3293 Location: 8360400-8360781 bp Feature: domain Description: COG3293 Location: 8360400-8360781 bp Feature: gene Location: 8361326-8362207 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8361539-8362076 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8361 539-8362076 bp Feature: gene Location: 8362682-8363083 bp Feature: gene Location: 8363260-8363898 bp Feature: domain Description: AdoMet_MTases Location: 8363377-8363662 bp Feature: domain Description: AdoMet_MTases Location: 8363377-8363662 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT