myRT

myRT report for GCA_005798445.1_ASM579844v1

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Seq: SYJG01000096.1 (49526 bp)
Overview 1 RT 1: 25046-30537 bp Neighborhood of RT #1 [25046, 30542] RVT-GII RVT-GII PRK05249 DUF1501 Feature: gene Location: 25046-25255 bp Feature: gene Location: 25252-25569 bp Feature: gene Location: 25590-25820 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 25632-25752 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 25632-25752 bp Feature: gene Location: 25838-26479 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 25841-26312 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 25841 -2631 2 bp Feature: gene Location: 26653-28692 bp Feature: domain Description: PRK05249 Location: 27253-28624 bp Feature: domain Description: PRK05249 Location: 27253-28624 bp Feature: gene Location: 29139-30542 bp Feature: domain Description: DUF1501 Location: 29298-30537 bp Feature: domain Description: DUF1 501 Location: 29298-30537 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PRK05249 (Si-specific NAD(P)(+) transhydrogenase), DUF1501 (pfam07394)

Seq: SYJG01000132.1 (3499 bp)
Overview 1 RT 1: 718-3496 bp Neighborhood of RT #1 [718, 3498] trmE trmE RVT-GII Feature: gene Location: 718-1878 bp Feature: domain Description: trmE Location: 742-1063 bp Feature: domain Description: trmE Location: 742 -1063 bp Feature: domain Description: trmE Location: 1237-1828 bp Feature: domain Description: trmE Location: 12 37-182 8 bp Feature: gene Location: 1887-2129 bp Feature: gene Location: 2347-3498 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2935-3496 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 935-3496 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT trmE (PRK05291), RVT-GII

Seq: SYJG01000081.1 (15608 bp)
Overview 1 RT 1: 1-6646 bp Neighborhood of RT #1 [1, 6654] PqqL PqqL RVT-Retrons lysidine_TilS_N DUF1501 Feature: gene Location: 1-2421 bp Feature: domain Description: PqqL Location: 13-1006 bp Feature: domain Description: PqqL Location: 13 -1006 bp Feature: domain Description: PqqL Location: 1123-2413 bp Feature: domain Description: PqqL Location: 1123 -2413 bp Feature: gene Location: 2779-4113 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3277-3883 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3 277-3 883 bp Feature: gene Location: 4242-5279 bp Feature: domain Description: lysidine_TilS_N Location: 4350-4914 bp Feature: domain Description: lysidine_TilS_N Location: 43 50-4914 bp Feature: gene Location: 5365-6654 bp Feature: domain Description: DUF1501 Location: 5479-6646 bp Feature: domain Description: DUF1501 Location: 5479-6646 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PqqL (COG0612), RVT-Retrons, lysidine_TilS_N (TIGR02432), DUF1501 (pfam07394)

Seq: SYJG01000417.1 (26315 bp)
Overview 1 RT 1: 10672-17486 bp Neighborhood of RT #1 [10672, 17486] RVT-CRISPR-like XerC Feature: gene Location: 10672-11217 bp Feature: gene Location: 11483-12247 bp Feature: gene Location: 12422-15244 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 14279-14855 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 14 279-14 855 bp Feature: gene Location: 15536-17179 bp Feature: domain Description: XerC Location: 16274-17030 bp Feature: domain Description: XerC Location: 16274 -17030 bp Feature: gene Location: 17301-17486 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-CRISPR, XerC (COG4973)