myRT

myRT report for GCA_005798485.1_ASM579848v1

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Seq: SYJF01000229.1 (10723 bp)
Overview 1 RT 1: 2903-9826 bp Neighborhood of RT #1 [2903, 9858] Avd_like YfmG RVT-DGRs Bacterial_IMPase_like_1 PRK08633 PRK08633 Feature: gene Location: 2903-3283 bp Feature: domain Description: Avd_like Location: 2930-3236 bp Feature: domain Description: Avd_like Location: 2930-3236 bp Feature: gene Location: 3191-3619 bp Feature: domain Description: YfmG Location: 3446-3581 bp Feature: domain Description: YfmG Location: 3446-3581 bp Feature: gene Location: 3780-4880 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 3987-4629 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 3987-4629 bp Feature: gene Location: 4942-5727 bp Feature: domain Description: Bacterial_IMPase_like_1 Location: 4972-5710 bp Feature: domain Description: Bacterial_IMPase_like_1 Location: 4972-571 0 bp Feature: gene Location: 6148-9858 bp Feature: domain Description: PRK08633 Location: 6217-7138 bp Feature: domain Description: PRK08633 Location: 621 7-71 38 bp Feature: domain Description: PRK08633 Location: 7345-9826 bp Feature: domain Description: PRK08633 Location: 7345-9826 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Avd_like (cd16376), YfmG (COG1262), RVT-DGRs, Bacterial_IMPase_like_1 (cd01641), PRK08633 (2-acyl-glycerophospho-ethanolamine acyltransferase; Validated)

Seq: SYJF01000131.1 (20503 bp)
Overview 1 RT 1: 376-3879 bp Neighborhood of RT #1 [376, 4232] group_II_RT_mat RVT-CRISPR-like DUF1016_N Feature: gene Location: 376-558 bp Feature: gene Location: 586-1620 bp Feature: gene Location: 1692-3137 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 1812-1995 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 1812 -1995 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 2055-2652 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 2 055-2 652 bp Feature: gene Location: 3148-3417 bp Feature: gene Location: 3447-4232 bp Feature: domain Description: DUF1016_N Location: 3645-3879 bp Feature: domain Description: DUF1016_N Location: 3645-3879 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT group_II_RT_mat (TIGR04416), RVT-CRISPR, DUF1016_N (pfam17761)

Seq: SYJF01000110.1 (17959 bp)
Overview 1 RT 1: 4166-9801 bp Neighborhood of RT #1 [4166, 9801] PqqL PqqL RVT-Retrons Feature: gene Location: 4166-6952 bp Feature: domain Description: PqqL Location: 4277-5540 bp Feature: domain Description: PqqL Location: 4277-5540 bp Feature: domain Description: PqqL Location: 5648-6920 bp Feature: domain Description: PqqL Location: 5648-6920 bp Feature: gene Location: 7097-7420 bp Feature: gene Location: 7327-8664 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 7825-8431 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 7825-843 1 bp Feature: gene Location: 8809-9540 bp Feature: gene Location: 9583-9801 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PqqL (COG0612), RVT-Retrons