myRT

myRT report for GCA_005800485.1_ASM580048v1

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Seq: SYFH01000003.1 (5137 bp)
Overview 1 RT 1: 3404-4667 bp Neighborhood of RT #1 [3404, 5134] MobA Cpn10 RVT-Retrons Feature: gene Location: 3404-4039 bp Feature: domain Description: MobA Location: 3410-4022 bp Feature: domain Description: MobA Location: 341 0-4022 bp Feature: gene Location: 4057-4407 bp Feature: domain Description: Cpn10 Location: 4096-4375 bp Feature: domain Description: Cpn1 0 Location: 4096-4375 bp Feature: gene Location: 4523-5134 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 4526-4667 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 4526-4667 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MobA (COG0746), Cpn10 (smart00883), RVT-Retrons

Seq: SYFH01000551.1 (20876 bp)
Overview 1 RT 1: 12521-18815 bp Neighborhood of RT #1 [12521, 18820] KOG3704 Methyltransf_25 PRK00566 RVT-UNC CspC Feature: gene Location: 12521-13324 bp Feature: domain Description: KOG3704 Location: 12539-13064 bp Feature: domain Description: KOG3704 Location: 12 539-13064 bp Feature: gene Location: 13613-14362 bp Feature: domain Description: Methyltransf_25 Location: 13757-14024 bp Feature: domain Description: Methyltransf_2 5 Location: 13757-1402 4 bp Feature: gene Location: 14446-16932 bp Feature: domain Description: PRK00566 Location: 15466-15559 bp Feature: domain Description: PRK00566 Location: 15466-15559 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 15688-16117 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 15688-16117 bp Feature: gene Location: 16981-18207 bp Feature: gene Location: 18617-18820 bp Feature: domain Description: CspC Location: 18620-18815 bp Feature: domain Description: CspC Location: 1862 0-18815 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT KOG3704 (KOG3704, Heparan sulfate D-glucosaminyl 3-O-sulfotransferase ), Methyltransf_25 (pfam13649), PRK00566 (DNA-directed RNA polymerase subunit beta'; Provisional), RVT-UG11/RVT-DGRs/RVT-CRISPR(RVT-UNC), CspC (COG1278)

Seq: SYFH01000383.1 (5921 bp)
Overview 1 RT 1: 3-5911 bp Neighborhood of RT #1 [3, 5919] HEAT_2 RVT-Retrons Feature: gene Location: 3-2951 bp Feature: domain Description: HEAT_2 Location: 195-402 bp Feature: domain Description: HEAT_2 Location: 195-402 bp Feature: gene Location: 3014-4603 bp Feature: gene Location: 4909-5919 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 5455-5911 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 5455-5911 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HEAT_2 (pfam13646), RVT-Retrons

Seq: SYFH01000417.1 (13410 bp)
Overview 1 RT 1: 847-5969 bp Neighborhood of RT #1 [847, 5969] Palm_thioest AcrR RVT-Retrons RsmC Feature: gene Location: 847-1974 bp Feature: domain Description: Palm_thioest Location: 1198-1366 bp Feature: domain Description: Palm_thioest Location: 1198-1366 bp Feature: gene Location: 2006-2614 bp Feature: domain Description: AcrR Location: 2021-2573 bp Feature: domain Description: AcrR Location: 2021-2573 bp Feature: gene Location: 2746-4239 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3376-4000 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3376-4 000 bp Feature: gene Location: 4432-5448 bp Feature: domain Description: RsmC Location: 4642-5422 bp Feature: domain Description: RsmC Location: 4 64 2-54 22 bp Feature: gene Location: 5589-5969 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Palm_thioest (pfam02089), AcrR (COG1309), RVT-Retrons, RsmC (COG2813)