myRT

myRT report for GCA_005805305.1_ASM580530v1

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Seq: SYMW01000298.1 (4966 bp)
Overview 1 RT 1: 186-4964 bp Neighborhood of RT #1 [186, 4964] DLH CxxCH_CxxCH_CxxCH_TIGR02603 GSDH RVT-GII GIIM Feature: gene Location: 186-1532 bp Feature: domain Description: DLH Location: 519-954 bp Feature: domain Description: DLH Location: 51 9-954 bp Feature: gene Location: 1678-3468 bp Feature: domain Description: CxxCH_CxxCH_CxxCH_TIGR02603 Location: 1837-2245 bp Feature: domain Description: CxxCH_CxxCH_CxxCH_TIGR02603 Location: 1 837-2245 bp Feature: domain Description: GSDH Location: 2452-3307 bp Feature: domain Description: GSDH Location: 2452-3307 bp Feature: gene Location: 3827-4549 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3983-4193 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3983-41 93 bp Feature: domain Description: GIIM Note: maturase Location: 4244-4454 bp Feature: domain Description: GIIM Note: maturase Location: 4244-4454 bp Feature: gene Location: 4836-4964 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DLH (pfam01738), CxxCH_CxxCH_CxxCH_TIGR02603, GSDH (pfam07995), RVT-GII, GIIM (pfam08388)

Seq: SYMW01000292.1 (29292 bp)
Overview 1 RT 1: 3400-11071 bp Neighborhood of RT #1 [3400, 11178] YfmG RVT-DGRs Hrd pfam03781 pfam03781 Feature: gene Location: 3400-5403 bp Feature: gene Location: 5502-5723 bp Feature: domain Description: YfmG Location: 5508-5619 bp Feature: domain Description: YfmG Location: 5508-5619 bp Feature: gene Location: 5737-6744 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 5944-6535 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 5944-6535 bp Feature: gene Location: 6741-7196 bp Feature: domain Description: Hrd Location: 6981-7185 bp Feature: domain Description: Hrd Location: 6981-7185 bp Feature: gene Location: 7327-11178 bp Feature: domain Description: pfam03781 Location: 9148-9934 bp Feature: domain Description: pfam03781 Location: 9148-9934 bp Feature: domain Description: pfam03781 Location: 10273-11071 bp Feature: domain Description: pfam03781 Location: 102 73-11071 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YfmG (COG1262), RVT-DGRs, Hrd (LOAD_Hrd), pfam03781 (FGE-sulfatase;Sulfatase-modifying factor enzyme 1)

Seq: SYMW01000302.1 (8964 bp)
Overview 1 RT 1: 9-2375 bp Neighborhood of RT #1 [9, 2446] RVT-GII GIIM Penicillinase_R Feature: gene Location: 9-1697 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 675-1326 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 675-13 26 bp Feature: domain Description: GIIM Note: maturase Location: 1395-1608 bp Feature: domain Description: GIIM Note: maturase Location: 13 95-1608 bp Feature: gene Location: 1770-1952 bp Feature: gene Location: 1994-2446 bp Feature: domain Description: Penicillinase_R Location: 2036-2375 bp Feature: domain Description: Penicillinase_R Location: 203 6-23 75 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), Penicillinase_R (pfam03965)