myRT

myRT report for GCA_005808475.1_ASM580847v1

Download annotations/find similar RTs

Seq: SYLY01000031.1 (5807 bp)
Overview 1 RT 1: 1272-5465 bp Neighborhood of RT #1 [1272, 5716] COG5635 YfmG RVT-DGRs Feature: gene Location: 1272-1466 bp Feature: gene Location: 1538-4321 bp Feature: domain Description: COG5635 Location: 2288-3017 bp Feature: domain Description: COG5635 Location: 2288-301 7 bp Feature: domain Description: YfmG Location: 3767-4310 bp Feature: domain Description: YfmG Location: 3767-431 0 bp Feature: gene Location: 4616-5716 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 4826-5465 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 4826-5465 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG5635 (Predicted NTPase, NACHT family domain ), YfmG (COG1262), RVT-DGRs

Seq: SYLY01000313.1 (29194 bp)
Overview 1 RT 1: 24876-28608 bp Neighborhood of RT #1 [24876, 28643] Cas10_III Csx3_III-U RVT-CRISPR Cas_Cas1 Cas2_I_II_III Feature: gene Location: 24876-25199 bp Feature: domain Description: Cas10_III Location: 24891-25041 bp Feature: domain Description: Cas10_III Location: 2 4891-2 5041 bp Feature: gene Location: 25897-26220 bp Feature: domain Description: Csx3_III-U Location: 26041-26206 bp Feature: domain Description: Csx3_III-U Location: 2 6041-2 62 06 bp Feature: gene Location: 26350-28395 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 26554-27148 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 2 6554-2 7148 bp Feature: domain Description: Cas_Cas1 Location: 27367-28225 bp Feature: domain Description: Cas_Cas1 Location: 2 7367-2 82 2 5 bp Feature: gene Location: 28419-28643 bp Feature: domain Description: Cas2_I_II_III Location: 28422-28608 bp Feature: domain Description: Cas2 _I_II_III Location: 2 842 2 -2 8608 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Cas10_III (cl21742), Csx3_III-U (cl09837), RVT-CRISPR, Cas_Cas1 (pfam01867), Cas2_I_II_III (cl11442)

Seq: SYLY01000292.1 (11627 bp)
Overview 1 RT 1: 1865-7382 bp Neighborhood of RT #1 [1865, 7390] UxuA UxuA RVT-DGRs Avd_like YfmG Feature: gene Location: 1865-2878 bp Feature: domain Description: UxuA Location: 1931-2210 bp Feature: domain Description: UxuA Location: 193 1-2210 bp Feature: domain Description: UxuA Location: 2318-2858 bp Feature: domain Description: UxuA Location: 23 18-2858 bp Feature: gene Location: 2917-3066 bp Feature: gene Location: 3120-4250 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 3327-3972 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 3 3 27-3 972 bp Feature: gene Location: 4222-4596 bp Feature: domain Description: Avd_like Location: 4243-4549 bp Feature: domain Description: Avd_like Location: 4243 -4549 bp Feature: gene Location: 4694-7390 bp Feature: domain Description: YfmG Location: 6719-7382 bp Feature: domain Description: YfmG Location: 6719-73 82 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT UxuA (pfam03786), RVT-DGRs, Avd_like (cd16376), YfmG (COG1262)

Seq: SYLY01000043.1 (13722 bp)
Overview 1 RT 1: 11310-13488 bp Neighborhood of RT #1 [11310, 13631] KOG4178 YcbX YcbX RVT-DGRs Feature: gene Location: 11310-12257 bp Feature: domain Description: KOG4178 Location: 11403-12249 bp Feature: domain Description: KOG4 178 Location: 114 03-1224 9 bp Feature: gene Location: 12327-12962 bp Feature: domain Description: YcbX Location: 12330-12531 bp Feature: domain Description: YcbX Location: 12330-12531 bp Feature: domain Description: YcbX Location: 12693-12954 bp Feature: domain Description: YcbX Location: 12693-12954 bp Feature: gene Location: 13101-13631 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 13311-13488 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 13311-134 88 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT KOG4178 (KOG4178, Soluble epoxide hydrolase ), YcbX (COG3217), RVT-DGRs

Seq: SYLY01000025.1 (20208 bp)
Overview 1 RT 1: 9316-16223 bp Neighborhood of RT #1 [9316, 16273] DUF4062 COG5635 YfmG Avd_like RVT-DGRs ParD PQQ_3 PQQ_2 PQQ Feature: gene Location: 9316-12045 bp Feature: domain Description: DUF4062 Location: 9337-9589 bp Feature: domain Description: DUF4062 Location: 9337-95 89 bp Feature: domain Description: COG5635 Location: 10060-11119 bp Feature: domain Description: COG5 635 Location: 10060-11119 bp Feature: domain Description: YfmG Location: 11413-12040 bp Feature: domain Description: YfmG Location: 11413-12040 bp Feature: gene Location: 12419-12901 bp Feature: domain Description: Avd_like Location: 12554-12857 bp Feature: domain Description: Avd_like Location: 125 5 4-1285 7 bp Feature: gene Location: 12894-14162 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 13119-13752 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 13119-1375 2 bp Feature: gene Location: 14451-14723 bp Feature: domain Description: ParD Location: 14454-14634 bp Feature: domain Description: ParD Location: 1445 4-14634 bp Feature: gene Location: 14879-16273 bp Feature: domain Description: PQQ_3 Location: 15035-15122 bp Feature: domain Description: PQQ_3 Location: 15 035 -15 122 bp Feature: domain Description: PQQ_2 Location: 15272-15755 bp Feature: domain Description: PQQ_2 Location: 15 272-15 75 5 bp Feature: domain Description: PQQ Location: 15920-16223 bp Feature: domain Description: PQQ Location: 15 920-16223 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF4062 (pfam13271), COG5635 (Predicted NTPase, NACHT family domain ), YfmG (COG1262), Avd_like (cd16376), RVT-DGRs, ParD (pfam09386), PQQ_3 (pfam13570), PQQ_2 (pfam13360), PQQ (smart00564)

Seq: SYLY01000039.1 (22803 bp)
Overview 1 RT 1: 16426-22788 bp Neighborhood of RT #1 [16426, 22802] Trypsin_2 NACHT YfmG Avd_like RVT-DGRs COG5635 YfmG Feature: gene Location: 16426-19296 bp Feature: domain Description: Trypsin_2 Location: 16498-16852 bp Feature: domain Description: Trypsin_2 Location: 16 498-16 852 bp Feature: domain Description: NACHT Location: 17218-17734 bp Feature: domain Description: NACHT Location: 17218-17734 bp Feature: domain Description: YfmG Location: 18619-19276 bp Feature: domain Description: YfmG Location: 186 19-19276 bp Feature: gene Location: 19365-19718 bp Feature: domain Description: Avd_like Location: 19398-19707 bp Feature: domain Description: Avd_like Location: 19398-19707 bp Feature: gene Location: 19826-20788 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 19904-20546 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 19904-20546 bp Feature: gene Location: 21090-22802 bp Feature: domain Description: COG5635 Location: 21141-21954 bp Feature: domain Description: COG56 35 Location: 21141-21954 bp Feature: domain Description: YfmG Location: 22230-22788 bp Feature: domain Description: YfmG Location: 22230-22788 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Trypsin_2 (pfam13365), NACHT (pfam05729), YfmG (COG1262), Avd_like (cd16376), RVT-DGRs, COG5635 (Predicted NTPase, NACHT family domain )