myRT

myRT report for GCA_005809115.1_ASM580911v1

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Seq: SYLK01000647.1 (5364 bp)
Overview 1 RT 1: 112-2550 bp Neighborhood of RT #1 [112, 2576] RVT-Retrons PQQ_2 PQQ_ADH_II PQQ_2 Feature: gene Location: 112-489 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 118-460 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 1 8-460 bp Feature: gene Location: 535-855 bp Feature: gene Location: 1317-2576 bp Feature: domain Description: PQQ_2 Location: 1473-1761 bp Feature: domain Description: PQQ_2 Location: 1 473-1 761 bp Feature: domain Description: PQQ_ADH_II Location: 1803-2061 bp Feature: domain Description: PQQ_ADH_II Location: 1 803-2061 bp Feature: domain Description: PQQ_2 Location: 2295-2550 bp Feature: domain Description: PQQ_2 Location: 2295-2550 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, PQQ_2 (pfam13360), PQQ_ADH_II (cd10279)

Seq: SYLK01000012.1 (6614 bp)
Overview 1 RT 1: 690-6613 bp Neighborhood of RT #1 [690, 6612] SWIM RVT-Retrons PRK01076 Feature: gene Location: 690-2585 bp Feature: gene Location: 2585-4099 bp Feature: domain Description: SWIM Location: 3974-4058 bp Feature: domain Description: SWIM Location: 3974-4058 bp Feature: gene Location: 4068-5726 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 4902-5514 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 4902 -5514 bp Feature: gene Location: 5806-6612 bp Feature: domain Description: PRK01076 Location: 5827-6613 bp Feature: domain Description: PRK01076 Location: 582 7-6613 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SWIM (pfam04434), RVT-Retrons, PRK01076 (L-rhamnose isomerase; Provisional)

Seq: SYLK01000762.1 (3591 bp)
Overview 1 RT 1: 112-2217 bp Neighborhood of RT #1 [112, 2217] CRISPR_Cas6 RVT-CRISPR Feature: gene Location: 112-1431 bp Feature: domain Description: CRISPR_Cas6 Location: 364-757 bp Feature: domain Description: CRISPR_Cas6 Location: 3 64-757 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 961-1402 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 961-1402 bp Feature: gene Location: 793-1857 bp Feature: gene Location: 1978-2217 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT CRISPR_Cas6 (pfam10040), RVT-CRISPR