myRT

myRT report for GCA_005819845.1_ASM581984v1

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Seq: VANE01000019.1 (92639 bp)
Overview 1 RT 1: 95-4853 bp Neighborhood of RT #1 [95, 4918] RVT-GII GIIM YadS Glu-decarb-GAD Feature: gene Location: 95-223 bp Feature: gene Location: 1298-2581 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1511-2132 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 51 1 -21 32 bp Feature: domain Description: GIIM Note: maturase Location: 2174-2399 bp Feature: domain Description: GIIM Note: maturase Location: 21 74-2399 bp Feature: gene Location: 2702-3316 bp Feature: domain Description: YadS Location: 2705-3299 bp Feature: domain Description: YadS Location: 2705-3299 bp Feature: gene Location: 3518-4918 bp Feature: domain Description: Glu-decarb-GAD Location: 3563-4853 bp Feature: domain Description: Glu-decarb-GAD Location: 3563-4853 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), YadS (COG2860), Glu-decarb-GAD (TIGR01788)

Seq: VANE01000008.1 (141577 bp)
Overview 1 RT 1: 110829-116270 bp Neighborhood of RT #1 [110829, 116290] phage_xxxx SLATT_5 RVT-UG3 RVT-UG8 Phage_holin_2_3 lyz_P1 Feature: gene Location: 110829-111407 bp Feature: domain Description: phage_xxxx Location: 110835-111030 bp Feature: domain Description: phage_xxxx Location: 110835-111030 bp Feature: gene Location: 111568-112167 bp Feature: domain Description: SLATT_5 Location: 111583-112150 bp Feature: domain Description: SLATT_5 Location: 111583-112 150 bp Feature: gene Location: 112193-113347 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 112457-112907 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 112 457-112 907 bp Feature: gene Location: 113340-115262 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 113838-114282 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 113838-1142 82 bp Feature: gene Location: 115555-115770 bp Feature: domain Description: Phage_holin_2_3 Location: 115564-115717 bp Feature: domain Description: Phage_holin_2 _3 Location: 115564-115717 bp Feature: gene Location: 115748-116290 bp Feature: domain Description: lyz_P1 Location: 115841-116270 bp Feature: domain Description: lyz_P1 Location: 115841-1162 70 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT phage_xxxx (TIGR02642), SLATT_5 (pfam18160), RVT-UG3, RVT-UG8, Phage_holin_2_3 (pfam16080), lyz_P1 (cd16901)