myRT

myRT report for GCA_005819885.1_ASM581988v1

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Seq: VANH01000019.1 (92459 bp)
Overview 1 RT 1: 1118-4673 bp Neighborhood of RT #1 [1118, 4738] RVT-GII GIIM YadS Glu-decarb-GAD Feature: gene Location: 1118-2401 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1331-1952 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 331 -1 952 bp Feature: domain Description: GIIM Note: maturase Location: 1994-2219 bp Feature: domain Description: GIIM Note: maturase Location: 1 994-221 9 bp Feature: gene Location: 2522-3136 bp Feature: domain Description: YadS Location: 2525-3119 bp Feature: domain Description: YadS Location: 2525-31 1 9 bp Feature: gene Location: 3338-4738 bp Feature: domain Description: Glu-decarb-GAD Location: 3383-4673 bp Feature: domain Description: Glu-decarb-GAD Location: 3383-4673 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), YadS (COG2860), Glu-decarb-GAD (TIGR01788)

Seq: VANH01000010.1 (141575 bp)
Overview 1 RT 1: 110827-116268 bp Neighborhood of RT #1 [110827, 116288] phage_xxxx SLATT_5 RVT-UG3 RVT-UG8 Phage_holin_2_3 lyz_P1 Feature: gene Location: 110827-111405 bp Feature: domain Description: phage_xxxx Location: 110833-111028 bp Feature: domain Description: phage_xxxx Location: 110833-11102 8 bp Feature: gene Location: 111566-112165 bp Feature: domain Description: SLATT_5 Location: 111581-112148 bp Feature: domain Description: SLATT_5 Location: 111581-112 148 bp Feature: gene Location: 112191-113345 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 112455-112905 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 112 455-112 905 bp Feature: gene Location: 113338-115260 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 113836-114280 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 113836-1142 80 bp Feature: gene Location: 115553-115768 bp Feature: domain Description: Phage_holin_2_3 Location: 115562-115715 bp Feature: domain Description: Phage_holin_2 _3 Location: 115562 -115715 bp Feature: gene Location: 115746-116288 bp Feature: domain Description: lyz_P1 Location: 115839-116268 bp Feature: domain Description: lyz_P1 Location: 115839-1162 68 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT phage_xxxx (TIGR02642), SLATT_5 (pfam18160), RVT-UG3, RVT-UG8, Phage_holin_2_3 (pfam16080), lyz_P1 (cd16901)