myRT

myRT report for GCA_005844455.1_ASM584445v1

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Seq: SPGF01000001.1 (124373 bp)
Overview 1 RT 1: 22704-28121 bp 2 RT 2: 66534-77938 bp Neighborhood of RT #1 [22704, 28360] VirD4 RVT-GII SR_TndX_transposase Recombinase Zn_ribbon_recom DUF4368 Neighborhood of RT #2 [66534, 77938] PHA03411 COG4646 COG4646 HELICc RVT_N RVT-GII GIIM Feature: gene Location: 22704-23480 bp Feature: domain Description: VirD4 Location: 22947-23460 bp Feature: domain Description: VirD4 Location: 22947-23460 bp Feature: gene Location: 23800-23979 bp Feature: gene Location: 24159-26066 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 24489-25233 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 24489-25233 bp Feature: gene Location: 26288-26482 bp Feature: gene Location: 26522-28360 bp Feature: domain Description: SR_TndX_transposase Location: 26546-26960 bp Feature: domain Description: SR_TndX_transposase Location: 26546-26960 bp Feature: domain Description: Recombinase Location: 27062-27419 bp Feature: domain Description: Recombinase Location: 27062-2741 9 bp Feature: domain Description: Zn_ribbon_recom Location: 27464-27647 bp Feature: domain Description: Zn_ribbon_recom Location: 27464-27647 bp Feature: domain Description: DUF4368 Location: 27926-28121 bp Feature: domain Description: DUF4368 Location: 27926-281 21 bp Feature: gene Location: 66534-73511 bp Feature: domain Description: PHA03411 Location: 69669-69978 bp Feature: domain Description: PHA0341 1 Location: 69669-69978 bp Feature: domain Description: COG4646 Location: 70293-71049 bp Feature: domain Description: COG4646 Location: 70293-71 049 bp Feature: domain Description: COG4646 Location: 71157-73017 bp Feature: domain Description: COG4646 Location: 71 1 57-7301 7 bp Feature: domain Description: HELICc Location: 73068-73431 bp Feature: domain Description: HELICc Location: 73068-73431 bp Feature: gene Location: 73860-73997 bp Feature: gene Location: 74067-75737 bp Feature: domain Description: RVT_N Location: 74112-74355 bp Feature: domain Description: RVT_N Location: 741 1 2-74355 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 74400-75048 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 74400-75048 bp Feature: domain Description: GIIM Note: maturase Location: 75102-75333 bp Feature: domain Description: GIIM Note: maturase Location: 751 02-75333 bp Feature: gene Location: 75871-77226 bp Feature: gene Location: 77279-77938 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: SPGF01000081.1 (6069 bp)
Overview 1 RT 1: 2227-5956 bp Neighborhood of RT #1 [2227, 5970] MviM SrmB RVT-GII COG3293 Feature: gene Location: 2227-3240 bp Feature: domain Description: MviM Location: 2263-3142 bp Feature: domain Description: MviM Location: 2 2 63-3142 bp Feature: gene Location: 3237-4319 bp Feature: domain Description: SrmB Location: 3249-4272 bp Feature: domain Description: SrmB Location: 32 49-42 72 bp Feature: gene Location: 4769-5485 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4775-5339 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4775-5339 bp Feature: gene Location: 5581-5970 bp Feature: domain Description: COG3293 Location: 5584-5956 bp Feature: domain Description: COG32 93 Location: 5584-5956 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT