myRT

myRT report for GCA_005844555.1_ASM584455v1

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Seq: SPGI01000025.1 (81188 bp)
Overview 1 RT 1: 74026-76446 bp Neighborhood of RT #1 [74026, 76446] HTH_XRE RVT-Retrons Feature: gene Location: 74026-74418 bp Feature: gene Location: 74455-74763 bp Feature: domain Description: HTH_XRE Location: 74467-74632 bp Feature: domain Description: HTH_XRE Location: 74467-74632 bp Feature: gene Location: 74741-75691 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 74921-75464 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 74921 -75464 bp Feature: gene Location: 75816-76253 bp Feature: gene Location: 76252-76446 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_XRE (smart00530), RVT-Retrons

Seq: SPGI01000008.1 (152274 bp)
Overview 1 RT 1: 20749-27996 bp 2 RT 2: 34975-41218 bp Neighborhood of RT #1 [20749, 28016] proA PRK09692 RVT-UG3 RVT-UG8 PRK09678 Psu Neighborhood of RT #2 [34975, 41355] Phage_integrase RVT-UG5 nitrilase AbiEi_3_N AbiEi_3 AbiEii Feature: gene Location: 20749-22002 bp Feature: domain Description: proA Location: 20776-21967 bp Feature: domain Description: proA Location: 2 0776-2 1967 bp Feature: gene Location: 22356-23534 bp Feature: domain Description: PRK09692 Location: 22362-23520 bp Feature: domain Description: PRK09692 Location: 2 2 362 -2 352 0 bp Feature: gene Location: 23536-24732 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 23821-24283 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 2 382 1-2 42 83 bp Feature: gene Location: 24736-26739 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 25231-25678 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 2 52 31-2 5678 bp Feature: gene Location: 27188-27460 bp Feature: domain Description: PRK09678 Location: 27197-27365 bp Feature: domain Description: PRK09678 Location: 2 7197-2 7365 bp Feature: gene Location: 27462-28016 bp Feature: domain Description: Psu Location: 27486-27996 bp Feature: domain Description: Psu Location: 2 7486-2 7996 bp Feature: gene Location: 34975-35241 bp Feature: domain Description: Phage_integrase Location: 35041-35137 bp Feature: domain Description: Phage_integrase Location: 35041-35137 bp Feature: gene Location: 35324-35794 bp Feature: gene Location: 36141-39350 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 36669-37158 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 36669-37158 bp Feature: domain Description: nitrilase Location: 38664-39261 bp Feature: domain Description: nitrilase Location: 38664-392 61 bp Feature: gene Location: 39645-40448 bp Feature: domain Description: AbiEi_3_N Location: 39678-39939 bp Feature: domain Description: AbiEi_3_N Location: 39678-39939 bp Feature: domain Description: AbiEi_3 Location: 39951-40407 bp Feature: domain Description: AbiEi_3 Location: 39951-40407 bp Feature: gene Location: 40435-41355 bp Feature: domain Description: AbiEii Location: 40477-41218 bp Feature: domain Description: AbiEii Location: 40477-412 18 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT proA (TIGR00407), PRK09692 (Integrase; provisional), RVT-UG3, RVT-UG8, PRK09678 (DNA-binding transcriptional regulator; Provisional), Psu (pfam07455), Phage_integrase (pfam00589), RVT-UG5, nitrilase (cl11424), AbiEi_3_N (pfam17194)
AbiEi_3 (pfam11459), AbiEii (pfam08843)