myRT

myRT report for GCA_005844645.1_ASM584464v1

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Seq: SPGL01000096.1 (2704 bp)
Overview 1 RT 1: 273-2631 bp Neighborhood of RT #1 [273, 2639] KOG4768 RVT-GII Feature: gene Location: 273-968 bp Feature: domain Description: KOG4768 Location: 330-963 bp Feature: domain Description: KOG4768 Location: 330-963 bp Feature: gene Location: 1716-2639 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2082-2631 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2082-2631 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT KOG4768 (KOG4768, Mitochondrial mRNA maturase ), RVT-GII

Seq: SPGL01000101.1 (1846 bp)
Overview 1 RT 1: 137-1702 bp Neighborhood of RT #1 [137, 1788] RVT-GII GIIM Feature: gene Location: 137-268 bp Feature: gene Location: 544-1788 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 748-1405 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 748-1405 bp Feature: domain Description: GIIM Note: maturase Location: 1486-1702 bp Feature: domain Description: GIIM Note: maturase Location: 1486-1702 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: SPGL01000023.1 (70196 bp)
Overview 1 RT 1: 67183-70123 bp Neighborhood of RT #1 [67183, 70131] RelB_DinJ FtsK_SpoIIIE RVT-GII Feature: gene Location: 67183-67518 bp Feature: domain Description: RelB_DinJ Location: 67387-67510 bp Feature: domain Description: RelB_DinJ Location: 673 87-67510 bp Feature: gene Location: 67580-68578 bp Feature: domain Description: FtsK_SpoIIIE Location: 68252-68498 bp Feature: domain Description: FtsK_SpoIIIE Location: 68252-68498 bp Feature: gene Location: 69184-70131 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 69448-70123 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 69448-70123 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RelB_DinJ (TIGR02384), FtsK_SpoIIIE (pfam01580), RVT-GII

Seq: SPGL01000116.1 (1134 bp)
Overview 1 RT 1: 341-1133 bp Neighborhood of RT #1 [341, 1132] RVT-GII Feature: gene Location: 341-1132 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 662-1133 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 662-1133 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: SPGL01000040.1 (42371 bp)
Overview 1 RT 1: 105-3027 bp 2 RT 2: 29394-32551 bp Neighborhood of RT #1 [105, 3056] RVT-GII HNHc TpcC YibE_F Neighborhood of RT #2 [29394, 32586] DUF3173 Arm-DNA-bind_4 Phage_int_SAM_3 INT_ICEBs1_C_like RVT-GII KOG4768 Relaxase Feature: gene Location: 105-1064 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 108-249 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 108-249 bp Feature: domain Description: HNHc Note: nucleases Location: 774-939 bp Feature: domain Description: HNHc Note: nucleases Location: 774-939 bp Feature: gene Location: 1241-2152 bp Feature: domain Description: TpcC Location: 1472-2138 bp Feature: domain Description: TpcC Location: 1472-2138 bp Feature: gene Location: 2301-3056 bp Feature: domain Description: YibE_F Location: 2313-3027 bp Feature: domain Description: YibE_F Location: 2313-3027 bp Feature: gene Location: 29394-29579 bp Feature: domain Description: DUF3173 Location: 29400-29571 bp Feature: domain Description: DUF3173 Location: 29400-295 71 bp Feature: gene Location: 29584-30732 bp Feature: domain Description: Arm-DNA-bind_4 Location: 29629-29761 bp Feature: domain Description: Arm-DNA-bind_4 Location: 29629-29761 bp Feature: domain Description: Phage_int_SAM_3 Location: 29785-29953 bp Feature: domain Description: Phage_int_SAM_3 Location: 29785 -2995 3 bp Feature: domain Description: INT_ICEBs1_C_like Location: 30151-30676 bp Feature: domain Description: INT_ICEBs1_C_like Location: 3015 1-30676 bp Feature: gene Location: 31089-31505 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 31173-31470 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 31173-31470 bp Feature: gene Location: 31420-31692 bp Feature: domain Description: KOG4768 Location: 31444-31645 bp Feature: domain Description: KOG4768 Location: 31444-31645 bp Feature: gene Location: 32224-32586 bp Feature: domain Description: Relaxase Location: 32254-32551 bp Feature: domain Description: Relaxase Location: 3225 4-325 5 1 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507), TpcC (pfam12642), YibE_F (pfam07907), DUF3173 (pfam11372), Arm-DNA-bind_4 (pfam14657), Phage_int_SAM_3 (pfam14659), INT_ICEBs1_C_like (cd01189), KOG4768 (KOG4768, Mitochondrial mRNA maturase ), Relaxase (pfam03432)

Seq: SPGL01000073.1 (14875 bp)
Overview 1 RT 1: 105-2708 bp 2 RT 2: 10155-14704 bp Neighborhood of RT #1 [105, 2728] RVT-GII HNHc FtsK Dcm Neighborhood of RT #2 [10155, 14730] Lysozyme_like Spr RVT-GII Feature: gene Location: 105-1058 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 111-246 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 111-246 bp Feature: domain Description: HNHc Note: nucleases Location: 786-945 bp Feature: domain Description: HNHc Note: nucleases Location: 786 -945 bp Feature: gene Location: 1160-1540 bp Feature: domain Description: FtsK Location: 1175-1412 bp Feature: domain Description: FtsK Location: 1175-1412 bp Feature: gene Location: 1586-2728 bp Feature: domain Description: Dcm Location: 1589-2708 bp Feature: domain Description: Dcm Location: 1589-2708 bp Feature: gene Location: 10155-12278 bp Feature: gene Location: 12275-13225 bp Feature: domain Description: Lysozyme_like Location: 12422-12884 bp Feature: domain Description: Lysozyme_like Location: 12422-12884 bp Feature: domain Description: Spr Location: 12911-13208 bp Feature: domain Description: Spr Location: 12911-13208 bp Feature: gene Location: 13939-14730 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14254-14704 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14254-14704 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507), FtsK (COG1674), Dcm (COG0270), Lysozyme_like (pfam13702), Spr (COG0791)