myRT

myRT report for GCA_005844755.1_ASM584475v1

Download annotations/find similar RTs

Seq: SPHB01000001.1 (613978 bp)
Overview 1 RT 1: 321875-327197 bp Neighborhood of RT #1 [321875, 331318] RVT-DGRs Laminin_G_3 Laminin_G_3 Feature: gene Location: 321875-322117 bp Feature: gene Location: 322297-322782 bp Feature: gene Location: 322779-324083 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 322992-323586 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 322992-323586 bp Feature: gene Location: 324185-324403 bp Feature: gene Location: 324599-331318 bp Feature: domain Description: Laminin_G_3 Location: 326042-326120 bp Feature: domain Description: Laminin_G_3 Location: 326042-3261 20 bp Feature: domain Description: Laminin_G_3 Location: 326771-327197 bp Feature: domain Description: Laminin_G_3 Location: 326771 -3271 97 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: SPHB01000008.1 (279325 bp)
Overview 1 RT 1: 205-12481 bp Neighborhood of RT #1 [205, 12597] PDDEXK_2 RVT-Retrons DUF4011 DEXXQc_SF1 DEXXQc_SF1 TIGR00376 MTES_1575 DUF3320 rpsA Feature: gene Location: 205-1029 bp Feature: domain Description: PDDEXK_2 Location: 226-904 bp Feature: domain Description: PDDEXK_2 Location: 2 2 6-904 bp Feature: gene Location: 1196-3403 bp Feature: gene Location: 3609-4739 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3930-4473 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3930-4473 bp Feature: gene Location: 4741-10698 bp Feature: domain Description: DUF4011 Location: 5971-6484 bp Feature: domain Description: DUF4011 Location: 5971-6484 bp Feature: domain Description: DEXXQc_SF1 Location: 6823-7444 bp Feature: domain Description: DEXXQc_SF1 Location: 682 3-7444 bp Feature: domain Description: DEXXQc_SF1 Location: 8251-9010 bp Feature: domain Description: DEXXQc_SF1 Location: 82 51-9010 bp Feature: domain Description: TIGR00376 Location: 9139-9529 bp Feature: domain Description: TIGR00376 Location: 9139-952 9 bp Feature: domain Description: MTES_1575 Location: 9682-9967 bp Feature: domain Description: MTES_1575 Location: 9682 -9967 bp Feature: domain Description: DUF3320 Location: 10207-10348 bp Feature: domain Description: DUF332 0 Location: 102 07-10348 bp Feature: gene Location: 10795-12597 bp Feature: domain Description: rpsA Location: 10864-12481 bp Feature: domain Description: rpsA Location: 10864-12 481 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: SPHB01000023.1 (109801 bp)
Overview 1 RT 1: 68700-74748 bp Neighborhood of RT #1 [68700, 75398] NGN_SP_UpxY KOW_NusG Phage_int_SAM_5 INTN1_C_like RVT-Retrons REC Feature: gene Location: 68700-69278 bp Feature: domain Description: NGN_SP_UpxY Location: 68778-69060 bp Feature: domain Description: NGN_SP_UpxY Location: 68778-69060 bp Feature: domain Description: KOW_NusG Location: 69111-69222 bp Feature: domain Description: KOW_NusG Location: 69111-69222 bp Feature: gene Location: 69613-70578 bp Feature: domain Description: Phage_int_SAM_5 Location: 69646-69901 bp Feature: domain Description: Phage_int_SAM_5 Location: 69646-69901 bp Feature: domain Description: INTN1_C_like Location: 70006-70483 bp Feature: domain Description: INTN1_C_like Location: 70006-70483 bp Feature: gene Location: 70857-73076 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 71058-71643 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 71058-71643 bp Feature: gene Location: 73054-73698 bp Feature: gene Location: 73695-75398 bp Feature: domain Description: REC Location: 74490-74748 bp Feature: domain Description: REC Location: 74490-74748 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: SPHB01000057.1 (2491 bp)
Overview 1 RT 1: 115-2319 bp Neighborhood of RT #1 [115, 2319] RVT-GII Intron_maturas2 HNHc Feature: gene Location: 115-1923 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 379-1198 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 379-1198 bp Feature: domain Description: Intron_maturas2 Location: 1273-1600 bp Feature: domain Description: Intron_maturas2 Location: 1273-1600 bp Feature: domain Description: HNHc Note: nucleases Location: 1753-1900 bp Feature: domain Description: HNHc Note: nucleases Location: 1753-1900 bp Feature: gene Location: 1978-2319 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: SPHB01000005.1 (371234 bp)
Overview 1 RT 1: 204736-206279 bp 2 RT 2: 274745-279454 bp Neighborhood of RT #1 [204736, 206279] RVT-GII HTH_28 Neighborhood of RT #2 [274745, 279468] Bac_Flav_CT_G RVT-GII Intron_maturas2 HNHc Bac_Flav_CT_G Bac_Flav_CT_G Feature: gene Location: 204736-205098 bp Feature: gene Location: 205102-205311 bp Feature: gene Location: 205341-205538 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 205344-205536 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 205 344-205 5 36 bp Feature: gene Location: 205659-205949 bp Feature: domain Description: HTH_28 Location: 205683-205827 bp Feature: domain Description: HTH_28 Location: 205 683-205 827 bp Feature: gene Location: 206127-206279 bp Feature: gene Location: 274745-276574 bp Feature: domain Description: Bac_Flav_CT_G Location: 274748-276560 bp Feature: domain Description: Bac_Flav_CT_G Location: 274748-2765 60 bp Feature: gene Location: 276602-276775 bp Feature: gene Location: 277121-278932 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 277385-278207 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 277385 -278207 bp Feature: domain Description: Intron_maturas2 Location: 278282-278597 bp Feature: domain Description: Intron_maturas2 Location: 278282-2785 97 bp Feature: domain Description: HNHc Note: nucleases Location: 278753-278903 bp Feature: domain Description: HNHc Note: nucleases Location: 27875 3-278903 bp Feature: gene Location: 279010-279288 bp Feature: domain Description: Bac_Flav_CT_G Location: 279028-279286 bp Feature: domain Description: Bac_Flav_CT_G Location: 279028-279286 bp Feature: gene Location: 279295-279468 bp Feature: domain Description: Bac_Flav_CT_G Location: 279298-279454 bp Feature: domain Description: Bac_Flav_CT_G Location: 279298-27945 4 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT