myRT

myRT report for GCA_005844865.1_ASM584486v1

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Seq: SPGQ01000014.1 (175489 bp)
Overview 1 RT 1: 205-12481 bp Neighborhood of RT #1 [205, 12597] PDDEXK_2 RVT-Retrons DUF4011 DEXXQc_SF1 DEXXQc_SF1 TIGR00376 MTES_1575 DUF3320 rpsA Feature: gene Location: 205-1029 bp Feature: domain Description: PDDEXK_2 Location: 226-904 bp Feature: domain Description: PDDEXK_2 Location: 226-904 bp Feature: gene Location: 1196-3403 bp Feature: gene Location: 3609-4739 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3930-4473 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3930-4473 bp Feature: gene Location: 4741-10698 bp Feature: domain Description: DUF4011 Location: 5971-6484 bp Feature: domain Description: DUF401 1 Location: 5971 -6484 bp Feature: domain Description: DEXXQc_SF1 Location: 6823-7684 bp Feature: domain Description: DEXXQc_SF1 Location: 6823-7684 bp Feature: domain Description: DEXXQc_SF1 Location: 8251-9010 bp Feature: domain Description: DEXXQc_SF1 Location: 8251 -901 0 bp Feature: domain Description: TIGR00376 Location: 9139-9529 bp Feature: domain Description: TIGR00376 Location: 91 39-9529 bp Feature: domain Description: MTES_1575 Location: 9682-9967 bp Feature: domain Description: MTES_1 575 Location: 9682-9967 bp Feature: domain Description: DUF3320 Location: 10207-10348 bp Feature: domain Description: DUF3320 Location: 1 0207-1 0348 bp Feature: gene Location: 10795-12597 bp Feature: domain Description: rpsA Location: 10864-12481 bp Feature: domain Description: rpsA Location: 1 0864-1 2481 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: SPGQ01000004.1 (417338 bp)
Overview 1 RT 1: 98565-102096 bp Neighborhood of RT #1 [98565, 102096] DUF1566 Avd_like RVT-DGRs Feature: gene Location: 98565-99374 bp Feature: domain Description: DUF1566 Location: 99096-99345 bp Feature: domain Description: DUF1566 Location: 99096-99345 bp Feature: gene Location: 99521-99928 bp Feature: domain Description: Avd_like Location: 99554-99863 bp Feature: domain Description: Avd_like Location: 99554-99863 bp Feature: gene Location: 99943-101364 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 100318-101020 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 100318-10102 0 bp Feature: gene Location: 101327-101605 bp Feature: gene Location: 101803-102096 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: SPGQ01000005.1 (345508 bp)
Overview 1 RT 1: 35378-40767 bp Neighborhood of RT #1 [35378, 40778] DUF3876 RVT-GII Intron_maturas2 HNHc Bac_Flav_CT_G Feature: gene Location: 35378-35749 bp Feature: domain Description: DUF3876 Location: 35459-35732 bp Feature: domain Description: DUF3 876 Location: 3 5459-3 573 2 bp Feature: gene Location: 35764-35892 bp Feature: gene Location: 35987-37810 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 36251-37073 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 6251-3 7073 bp Feature: domain Description: Intron_maturas2 Location: 37238-37490 bp Feature: domain Description: Intron_maturas2 Location: 3 723 8-3 7490 bp Feature: domain Description: HNHc Note: nucleases Location: 37601-37772 bp Feature: domain Description: HNHc Note: nucleases Location: 3 7601-3 7772 bp Feature: gene Location: 38068-38256 bp Feature: gene Location: 38379-40778 bp Feature: domain Description: Bac_Flav_CT_G Location: 38382-40767 bp Feature: domain Description: Bac_Flav_CT_G Location: 3 83 82-40767 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT