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myRT report for GCA_005844955.1_ASM584495v1
Download annotations/find similar RTs
Seq:
SPGW01000032.1 (77508 bp)
Overview
1
RT 1: 183-12459 bp
Neighborhood of RT #1 [183, 12575]
PDDEXK_2
RVT-Retrons
DUF4011
DEXXQc_SF1
DEXXQc_SF1
TIGR00376
MTES_1575
DUF3320
rpsA
Feature: gene
Location: 183-1007 bp
Feature: domain
Description: PDDEXK_2
Location: 204-882 bp
Feature: domain
Description: PDDEXK_2
Location: 204-882 bp
Feature: gene
Location: 1174-3381 bp
Feature: gene
Location: 3587-4717 bp
Feature: RT
Description: RVT-Retrons
Note: Retrons RT
Location: 3908-4451 bp
Feature: RT
Description: RVT-Retrons
Note: Retrons RT
Location: 3908-4451 bp
Feature: gene
Location: 4719-10676 bp
Feature: domain
Description: DUF4011
Location: 5949-6462 bp
Feature: domain
Description: DUF401 1
Location: 5949-6462 bp
Feature: domain
Description: DEXXQc_SF1
Location: 6801-7767 bp
Feature: domain
Description: DEXXQc_SF1
Location: 6801 -7767 bp
Feature: domain
Description: DEXXQc_SF1
Location: 8229-8988 bp
Feature: domain
Description: DEXXQc_SF1
Location: 8229-8988 bp
Feature: domain
Description: TIGR00376
Location: 9120-9507 bp
Feature: domain
Description: TIGR00376
Location: 91 20-9507 bp
Feature: domain
Description: MTES_1575
Location: 9660-9945 bp
Feature: domain
Description: MTES_1 575
Location: 9660-9945 bp
Feature: domain
Description: DUF3320
Location: 10185-10326 bp
Feature: domain
Description: DUF3320
Location: 1 01 85-1 0326 bp
Feature: gene
Location: 10773-12575 bp
Feature: domain
Description: rpsA
Location: 10842-12459 bp
Feature: domain
Description: rpsA
Location: 1 0842-1 2459 bp
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Associated domains:
Seq:
SPGW01000016.1 (143968 bp)
Overview
1
RT 1: 37433-40515 bp
Neighborhood of RT #1 [37433, 40592]
DUF4134
RVT-GII
Intron_maturas2
HNHc
DUF4134
DUF4133
Feature: gene
Location: 37433-37711 bp
Feature: domain
Description: DUF4134
Location: 37493-37694 bp
Feature: domain
Description: DUF4134
Location: 37493-37694 bp
Feature: gene
Location: 37723-38073 bp
Feature: gene
Location: 38253-40064 bp
Feature: RT
Description: RVT-GII
Note: GII (Group II introns RT)
Location: 38517-39339 bp
Feature: RT
Description: RVT-GII
Note: GII (Group II introns RT)
Location: 38517-39339 bp
Feature: domain
Description: Intron_maturas2
Location: 39528-39738 bp
Feature: domain
Description: Intron_maturas2
Location: 3952 8-39738 bp
Feature: domain
Description: HNHc
Note: nucleases
Location: 39888-39993 bp
Feature: domain
Description: HNHc
Note: nucleases
Location: 39888-39993 bp
Feature: gene
Location: 40089-40283 bp
Feature: domain
Description: DUF4134
Location: 40179-40269 bp
Feature: domain
Description: DUF4134
Location: 40179-402 69 bp
Feature: gene
Location: 40296-40592 bp
Feature: domain
Description: DUF4133
Location: 40338-40515 bp
Feature: domain
Description: DUF4133
Location: 40338-40515 bp
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Associated domains: