myRT

myRT report for GCA_005844965.1_ASM584496v1

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Seq: SPGX01000008.1 (217258 bp)
Overview 1 RT 1: 145905-147448 bp Neighborhood of RT #1 [145905, 147448] RVT-GII HTH_28 Feature: gene Location: 145905-146267 bp Feature: gene Location: 146271-146480 bp Feature: gene Location: 146510-146707 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 146513-146705 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 4651 3-1 46705 bp Feature: gene Location: 146828-147118 bp Feature: domain Description: HTH_28 Location: 146852-146996 bp Feature: domain Description: HTH_28 Location: 1 46852-1 46996 bp Feature: gene Location: 147296-147448 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: SPGX01000017.1 (113170 bp)
Overview 1 RT 1: 97165-108866 bp Neighborhood of RT #1 [97165, 108866] rpsA DUF4011 DEXXQc_SF1 DEXXQc_SF1 TIGR00376 MTES_1575 DUF3320 RVT-Retrons Feature: gene Location: 97165-98967 bp Feature: domain Description: rpsA Location: 97234-98851 bp Feature: domain Description: rpsA Location: 972 34-98851 bp Feature: gene Location: 99064-105021 bp Feature: domain Description: DUF4011 Location: 100294-100807 bp Feature: domain Description: DUF4011 Location: 1002 94-100807 bp Feature: domain Description: DEXXQc_SF1 Location: 101146-102007 bp Feature: domain Description: DEXXQc_SF1 Location: 101146-102 007 bp Feature: domain Description: DEXXQc_SF1 Location: 102574-103333 bp Feature: domain Description: DEXXQc_SF1 Location: 102 574-103333 bp Feature: domain Description: TIGR00376 Location: 103465-103852 bp Feature: domain Description: TIGR00376 Location: 103465-103852 bp Feature: domain Description: MTES_1575 Location: 104005-104290 bp Feature: domain Description: MTES_1575 Location: 104005-1042 90 bp Feature: domain Description: DUF3320 Location: 104530-104671 bp Feature: domain Description: DUF332 0 Location: 104530-104671 bp Feature: gene Location: 105023-106153 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 105344-105887 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 105344-105887 bp Feature: gene Location: 106358-108565 bp Feature: gene Location: 108705-108866 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: SPGX01000051.1 (35468 bp)
Overview 1 RT 1: 101-2119 bp Neighborhood of RT #1 [101, 2119] RVT-DGRs Feature: gene Location: 101-1138 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 107-644 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 107-644 bp Feature: gene Location: 1138-1620 bp Feature: gene Location: 1829-2119 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: SPGX01000035.1 (64765 bp)
Overview 1 RT 1: 1-3513 bp Neighborhood of RT #1 [1, 3527] Bac_Flav_CT_G RVT-GII Intron_maturas2 HNHc Bac_Flav_CT_G Bac_Flav_CT_G Feature: gene Location: 1-633 bp Feature: domain Description: Bac_Flav_CT_G Location: 79-619 bp Feature: domain Description: Bac_Flav_CT_G Location: 79-619 bp Feature: gene Location: 661-834 bp Feature: gene Location: 1180-2991 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1444-2266 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14 4 4 -2266 bp Feature: domain Description: Intron_maturas2 Location: 2341-2656 bp Feature: domain Description: Intron_maturas2 Location: 234 1-2656 bp Feature: domain Description: HNHc Note: nucleases Location: 2812-2962 bp Feature: domain Description: HNHc Note: nucleases Location: 2812-2962 bp Feature: gene Location: 3069-3347 bp Feature: domain Description: Bac_Flav_CT_G Location: 3087-3345 bp Feature: domain Description: Bac_Flav_CT_G Location: 3087-334 5 bp Feature: gene Location: 3354-3527 bp Feature: domain Description: Bac_Flav_CT_G Location: 3357-3513 bp Feature: domain Description: Bac_Flav_CT_G Location: 3357-3513 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: SPGX01000002.1 (347324 bp)
Overview 1 RT 1: 137020-140801 bp Neighborhood of RT #1 [137020, 140827] Chromate_transp RVT-DGRs Avd_like DUF1566 Feature: gene Location: 137020-137568 bp Feature: domain Description: Chromate_transp Location: 137032-137554 bp Feature: domain Description: Chromate_transp Location: 137032-1375 5 4 bp Feature: gene Location: 137812-138087 bp Feature: gene Location: 138053-139474 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 138425-139130 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 138425 -139130 bp Feature: gene Location: 139489-139869 bp Feature: domain Description: Avd_like Location: 139516-139822 bp Feature: domain Description: Avd_like Location: 1395 16-139822 bp Feature: gene Location: 140015-140827 bp Feature: domain Description: DUF1566 Location: 140549-140801 bp Feature: domain Description: DUF15 66 Location: 1405 49-140801 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: SPGX01000086.1 (2512 bp)
Overview 1 RT 1: 82-2372 bp Neighborhood of RT #1 [82, 2398] RVT-GII Intron_maturas2 HNHc Feature: gene Location: 82-582 bp Feature: gene Location: 590-2398 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 854-1676 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 854-16 76 bp Feature: domain Description: Intron_maturas2 Location: 1745-2057 bp Feature: domain Description: Intron_maturas2 Location: 1745-2057 bp Feature: domain Description: HNHc Note: nucleases Location: 2231-2372 bp Feature: domain Description: HNHc Note: nucleases Location: 2231-2372 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT