myRT

myRT report for GCA_005845265.1_ASM584526v1

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Seq: SPHP01000006.1 (259198 bp)
Overview 1 RT 1: 226564-233430 bp Neighborhood of RT #1 [226564, 233459] PRK06545 PRK14806 RVT-Retrons GDE_N GDE_C PurR Feature: gene Location: 226564-227664 bp Feature: domain Description: PRK06545 Location: 226579-227635 bp Feature: domain Description: PRK06545 Location: 226579-227635 bp Feature: gene Location: 227681-228958 bp Feature: domain Description: PRK14806 Location: 227693-228935 bp Feature: domain Description: PRK1 4806 Location: 227693-228935 bp Feature: gene Location: 229073-230086 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 229238-229793 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 229238-229793 bp Feature: gene Location: 230465-232444 bp Feature: domain Description: GDE_N Location: 230528-231158 bp Feature: domain Description: GDE_N Location: 230528-231 1 58 bp Feature: domain Description: GDE_C Location: 231314-232409 bp Feature: domain Description: GDE_C Location: 231 31 4-232409 bp Feature: gene Location: 232470-233459 bp Feature: domain Description: PurR Location: 232479-233430 bp Feature: domain Description: PurR Location: 232479-233430 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK06545 (prephenate dehydrogenase; Validated), PRK14806 (bifunctional cyclohexadienyl dehydrogenase/ 3-phosphoshikimate 1-carboxyvinyltransferase; Provisional), RVT-Retrons, GDE_N (pfam12439), GDE_C (pfam06202), PurR (COG1609)

Seq: SPHP01000059.1 (1717 bp)
Overview 1 RT 1: 2-1625 bp Neighborhood of RT #1 [2, 1625] RVT-GII GIIM Feature: gene Location: 2-1279 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 317-944 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 317-944 bp Feature: domain Description: GIIM Note: maturase Location: 998-1214 bp Feature: domain Description: GIIM Note: maturase Location: 998-12 14 bp Feature: gene Location: 1494-1625 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: SPHP01000016.1 (119183 bp)
Overview 1 RT 1: 88478-92428 bp Neighborhood of RT #1 [88478, 92428] PBP2_phosphate_like_1 RVT-UG2 Feature: gene Location: 88478-89410 bp Feature: domain Description: PBP2_phosphate_like_1 Location: 88682-89393 bp Feature: domain Description: PBP2_phosphate_like_1 Location: 88682-893 93 bp Feature: gene Location: 89615-89878 bp Feature: gene Location: 90242-91639 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 90485-91322 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 90485-913 22 bp Feature: gene Location: 91762-91896 bp Feature: gene Location: 92201-92428 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PBP2_phosphate_like_1 (cd13653), RVT-UG2

Seq: SPHP01000056.1 (2582 bp)
Overview 1 RT 1: 198-2428 bp Neighborhood of RT #1 [198, 2454] RVT-GII Intron_maturas2 HNHc Feature: gene Location: 198-452 bp Feature: gene Location: 658-2454 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 925-1735 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 925-1735 bp Feature: domain Description: Intron_maturas2 Location: 1801-2113 bp Feature: domain Description: Intron_maturas2 Location: 1801-2113 bp Feature: domain Description: HNHc Note: nucleases Location: 2272-2428 bp Feature: domain Description: HNHc Note: nucleases Location: 2272-24 28 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)