myRT

myRT report for GCA_005845305.1_ASM584530v1

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Seq: SPHA01000058.1 (2491 bp)
Overview 1 RT 1: 115-2319 bp Neighborhood of RT #1 [115, 2319] RVT-GII Intron_maturas2 HNHc Feature: gene Location: 115-1923 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 379-1198 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 379-1 1 98 bp Feature: domain Description: Intron_maturas2 Location: 1273-1600 bp Feature: domain Description: Intron_maturas2 Location: 1 273-1 600 bp Feature: domain Description: HNHc Note: nucleases Location: 1753-1900 bp Feature: domain Description: HNHc Note: nucleases Location: 1 753-1 900 bp Feature: gene Location: 1978-2319 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: SPHA01000008.1 (279325 bp)
Overview 1 RT 1: 205-12481 bp Neighborhood of RT #1 [205, 12597] PDDEXK_2 RVT-Retrons DUF4011 DEXXQc_SF1 DEXXQc_SF1 TIGR00376 MTES_1575 DUF3320 rpsA Feature: gene Location: 205-1029 bp Feature: domain Description: PDDEXK_2 Location: 226-904 bp Feature: domain Description: PDDEXK_2 Location: 2 2 6-904 bp Feature: gene Location: 1196-3403 bp Feature: gene Location: 3609-4739 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3930-4473 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3930-4473 bp Feature: gene Location: 4741-10698 bp Feature: domain Description: DUF4011 Location: 5971-6484 bp Feature: domain Description: DUF4011 Location: 5971-6484 bp Feature: domain Description: DEXXQc_SF1 Location: 6823-7444 bp Feature: domain Description: DEXXQc_SF1 Location: 682 3-7444 bp Feature: domain Description: DEXXQc_SF1 Location: 8251-9010 bp Feature: domain Description: DEXXQc_SF1 Location: 82 51-9010 bp Feature: domain Description: TIGR00376 Location: 9139-9529 bp Feature: domain Description: TIGR00376 Location: 9139-952 9 bp Feature: domain Description: MTES_1575 Location: 9682-9967 bp Feature: domain Description: MTES_1575 Location: 9682 -9967 bp Feature: domain Description: DUF3320 Location: 10207-10348 bp Feature: domain Description: DUF332 0 Location: 102 07-10348 bp Feature: gene Location: 10795-12597 bp Feature: domain Description: rpsA Location: 10864-12481 bp Feature: domain Description: rpsA Location: 10864-12 481 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: SPHA01000005.1 (346758 bp)
Overview 1 RT 1: 67604-72313 bp 2 RT 2: 140793-142336 bp Neighborhood of RT #1 [67604, 72327] Bac_Flav_CT_G Bac_Flav_CT_G RVT-GII Intron_maturas2 HNHc Bac_Flav_CT_G Neighborhood of RT #2 [140793, 142336] HTH_28 RVT-GII Feature: gene Location: 67604-67777 bp Feature: domain Description: Bac_Flav_CT_G Location: 67607-67763 bp Feature: domain Description: Bac_Flav_CT_G Location: 67607-67763 bp Feature: gene Location: 67784-68062 bp Feature: domain Description: Bac_Flav_CT_G Location: 67802-68060 bp Feature: domain Description: Bac_Flav_CT_G Location: 67802-68060 bp Feature: gene Location: 68140-69951 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 68404-69226 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 68404-69226 bp Feature: domain Description: Intron_maturas2 Location: 69301-69616 bp Feature: domain Description: Intron_maturas2 Location: 693 01-69616 bp Feature: domain Description: HNHc Note: nucleases Location: 69772-69922 bp Feature: domain Description: HNHc Note: nucleases Location: 69772-69922 bp Feature: gene Location: 70297-70470 bp Feature: gene Location: 70498-72327 bp Feature: domain Description: Bac_Flav_CT_G Location: 70501-72313 bp Feature: domain Description: Bac_Flav_CT_G Location: 70501-723 13 bp Feature: gene Location: 140793-140945 bp Feature: gene Location: 141123-141413 bp Feature: domain Description: HTH_28 Location: 141147-141291 bp Feature: domain Description: HTH_28 Location: 141147-141291 bp Feature: gene Location: 141534-141731 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 141537-141729 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14153 7-141729 bp Feature: gene Location: 141761-141970 bp Feature: gene Location: 141974-142336 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: SPHA01000001.1 (536411 bp)
Overview 1 RT 1: 321875-327197 bp Neighborhood of RT #1 [321875, 331318] RVT-DGRs Laminin_G_3 Laminin_G_3 Feature: gene Location: 321875-322117 bp Feature: gene Location: 322297-322782 bp Feature: gene Location: 322779-324083 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 322992-323586 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 322992-323586 bp Feature: gene Location: 324185-324403 bp Feature: gene Location: 324599-331318 bp Feature: domain Description: Laminin_G_3 Location: 326042-326120 bp Feature: domain Description: Laminin_G_3 Location: 32604 2-326120 bp Feature: domain Description: Laminin_G_3 Location: 326771-327197 bp Feature: domain Description: Laminin_G_3 Location: 326771-327197 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: SPHA01000022.1 (109801 bp)
Overview 1 RT 1: 34404-41046 bp Neighborhood of RT #1 [34404, 41102] REC RVT-Retrons Phage_int_SAM_5 INTN1_C_like NGN_SP_UpxY KOW_NusG Feature: gene Location: 34404-36095 bp Feature: domain Description: REC Location: 35187-35445 bp Feature: domain Description: REC Location: 35 187-35 445 bp Feature: gene Location: 36104-36748 bp Feature: gene Location: 36726-38945 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 36927-37512 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 36927-375 12 bp Feature: gene Location: 39224-40189 bp Feature: domain Description: Phage_int_SAM_5 Location: 39257-39512 bp Feature: domain Description: Phage_int_SAM_5 Location: 3925 7-395 12 bp Feature: domain Description: INTN1_C_like Location: 39617-40094 bp Feature: domain Description: INTN1_C_like Location: 39617-40094 bp Feature: gene Location: 40524-41102 bp Feature: domain Description: NGN_SP_UpxY Location: 40602-40884 bp Feature: domain Description: NGN_SP_UpxY Location: 40602-40884 bp Feature: domain Description: KOW_NusG Location: 40935-41046 bp Feature: domain Description: KOW_NusG Location: 40935 -41046 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT