myRT

myRT report for GCA_005862115.1_ASM586211v1

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Seq: VCEF01000083.1 (25056 bp)
Overview 1 RT 1: 123-3181 bp Neighborhood of RT #1 [123, 3181] RVT-GII TPR TPR_7 Feature: gene Location: 123-326 bp Feature: gene Location: 497-1810 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 752-1442 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 752-1 442 bp Feature: gene Location: 2077-2952 bp Feature: domain Description: TPR Location: 2377-2710 bp Feature: domain Description: TPR Location: 2377-271 0 bp Feature: domain Description: TPR_7 Location: 2776-2854 bp Feature: domain Description: TPR_7 Location: 2776-2854 bp Feature: gene Location: 2957-3181 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, TPR (smart00028), TPR_7 (pfam13176)

Seq: VCEF01000098.1 (27479 bp)
Overview 1 RT 1: 14885-27357 bp Neighborhood of RT #1 [14885, 27357] YD_repeat_2x YD_repeat_2x Rhs_assc_core ANK Ank_4 RVT-GII Feature: gene Location: 14885-24043 bp Feature: domain Description: YD_repeat_2x Location: 20858-20912 bp Feature: domain Description: YD_repeat_2 x Location: 2 0858-2 0912 bp Feature: domain Description: YD_repeat_2x Location: 22703-22787 bp Feature: domain Description: YD_repeat_2 x Location: 2 2 703-2 2 787 bp Feature: domain Description: Rhs_assc_core Location: 23039-23267 bp Feature: domain Description: Rhs_assc_core Location: 2 3039-2 32 67 bp Feature: gene Location: 24079-25290 bp Feature: domain Description: ANK Location: 24772-24961 bp Feature: domain Description: ANK Location: 2 4772 -2 4961 bp Feature: domain Description: Ank_4 Location: 24976-25126 bp Feature: domain Description: Ank_4 Location: 2 4976-2 512 6 bp Feature: gene Location: 25670-26983 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 25925-26615 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 592 5-2 6615 bp Feature: gene Location: 27154-27357 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YD_repeat_2x (TIGR01643), Rhs_assc_core (TIGR03696), ANK (smart00248), Ank_4 (pfam13637), RVT-GII

Seq: VCEF01000087.1 (13618 bp)
Overview 1 RT 1: 9323-13569 bp Neighborhood of RT #1 [9323, 13616] P22_portal RVT_N RVT-GII YkfC Feature: gene Location: 9323-11149 bp Feature: gene Location: 11163-12242 bp Feature: domain Description: P22_portal Location: 11310-11697 bp Feature: domain Description: P22_portal Location: 113 10-11697 bp Feature: gene Location: 12273-13616 bp Feature: domain Description: RVT_N Location: 12303-12540 bp Feature: domain Description: RVT_N Location: 123 03 -12540 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12591-13242 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12591-13 242 bp Feature: domain Description: YkfC Location: 13242-13569 bp Feature: domain Description: YkfC Location: 13 242-13 569 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT P22_portal (pfam16510), RVT_N (pfam13655), RVT-GII, YkfC (COG3344)

Seq: VCEF01000104.1 (10677 bp)
Overview 1 RT 1: 8309-10199 bp Neighborhood of RT #1 [8309, 10567] RVT-GII Feature: gene Location: 8309-8620 bp Feature: gene Location: 8880-9083 bp Feature: gene Location: 9254-10567 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9509-10199 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9509-10199 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: VCEF01000076.1 (7084 bp)
Overview 1 RT 1: 3370-7035 bp Neighborhood of RT #1 [3370, 7082] PMM_PGM PDDEXK_2 RVT_N RVT-GII YkfC Feature: gene Location: 3370-4725 bp Feature: domain Description: PMM_PGM Location: 3385-4678 bp Feature: domain Description: PMM_PGM Location: 3385 -4678 bp Feature: gene Location: 4832-5560 bp Feature: domain Description: PDDEXK_2 Location: 4958-5429 bp Feature: domain Description: PDDEXK_2 Location: 495 8-5 429 bp Feature: gene Location: 5739-7082 bp Feature: domain Description: RVT_N Location: 5769-6006 bp Feature: domain Description: RVT_N Location: 5 769-6006 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6057-6708 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 605 7-6708 bp Feature: domain Description: YkfC Location: 6708-7035 bp Feature: domain Description: YkfC Location: 6708-7035 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PMM_PGM (cd03089), PDDEXK_2 (pfam12784), RVT_N (pfam13655), RVT-GII, YkfC (COG3344)

Seq: VCEF01000081.1 (5620 bp)
Overview 1 RT 1: 111-2228 bp Neighborhood of RT #1 [111, 2228] RVT-GII Feature: gene Location: 111-1424 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 366-1056 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 36 6 -1056 bp Feature: gene Location: 1595-1798 bp Feature: gene Location: 1923-2228 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: VCEF01000101.1 (24870 bp)
Overview 1 RT 1: 15006-19569 bp Neighborhood of RT #1 [15006, 19569] AppC RVT-GII Feature: gene Location: 15006-16448 bp Feature: domain Description: AppC Location: 15054-16374 bp Feature: domain Description: AppC Location: 15054-1637 4 bp Feature: gene Location: 16937-17140 bp Feature: gene Location: 17311-18624 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17566-18256 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17 566-18256 bp Feature: gene Location: 18800-19216 bp Feature: gene Location: 19231-19569 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AppC (COG1271), RVT-GII

Seq: VCEF01000063.1 (9372 bp)
Overview 1 RT 1: 7156-8894 bp Neighborhood of RT #1 [7156, 9262] DUF1284 RVT-GII Feature: gene Location: 7156-7443 bp Feature: domain Description: DUF1284 Location: 7165-7408 bp Feature: domain Description: DUF128 4 Location: 7165-7408 bp Feature: gene Location: 7575-7778 bp Feature: gene Location: 7949-9262 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8204-8894 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8 204-8 8 94 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF1284 (pfam06935), RVT-GII

Seq: VCEF01000080.1 (3506 bp)
Overview 1 RT 1: 111-2571 bp Neighborhood of RT #1 [111, 2571] RVT-GII Feature: gene Location: 111-1424 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 366-1056 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 366-1056 bp Feature: gene Location: 1595-1798 bp Feature: gene Location: 2386-2571 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: VCEF01000084.1 (6165 bp)
Overview 1 RT 1: 123-2445 bp Neighborhood of RT #1 [123, 2465] RVT-GII gp6 Feature: gene Location: 123-326 bp Feature: gene Location: 497-1810 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 752-1442 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 752-1442 bp Feature: gene Location: 1874-2017 bp Feature: gene Location: 2061-2465 bp Feature: domain Description: gp6 Location: 2064-2445 bp Feature: domain Description: gp6 Location: 2064-2445 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, gp6 (cd08054)

Seq: VCEF01000111.1 (17756 bp)
Overview 1 RT 1: 1488-5462 bp Neighborhood of RT #1 [1488, 5500] PDDEXK_2 RVT_N RVT-GII RVT-GII GIIM HNHc T_den_put_tspse FeS_assembly_P ParA Feature: gene Location: 1488-1895 bp Feature: domain Description: PDDEXK_2 Location: 1566-1881 bp Feature: domain Description: PDDEXK_2 Location: 1566-1881 bp Feature: gene Location: 1931-2062 bp Feature: gene Location: 2376-3092 bp Feature: domain Description: RVT_N Location: 2427-2673 bp Feature: domain Description: RVT_N Location: 2427-2673 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2715-3027 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2715-3027 bp Feature: gene Location: 3161-4063 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3182-3401 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3182-3401 bp Feature: domain Description: GIIM Note: maturase Location: 3491-3710 bp Feature: domain Description: GIIM Note: maturase Location: 3491-3710 bp Feature: domain Description: HNHc Note: nucleases Location: 3908-4049 bp Feature: domain Description: HNHc Note: nucleases Location: 3908-4049 bp Feature: gene Location: 4060-4470 bp Feature: domain Description: T_den_put_tspse Location: 4165-4450 bp Feature: domain Description: T_den_put_tspse Location: 4165-4450 bp Feature: gene Location: 4478-5500 bp Feature: domain Description: FeS_assembly_P Location: 4499-4700 bp Feature: domain Description: FeS_assembly_P Location: 4499-4700 bp Feature: domain Description: ParA Location: 4760-5462 bp Feature: domain Description: ParA Location: 4760-5462 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PDDEXK_2 (pfam12784), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), T_den_put_tspse (TIGR01784), FeS_assembly_P (pfam01883), ParA (pfam10609)

Seq: VCEF01000085.1 (24029 bp)
Overview 1 RT 1: 123-4226 bp Neighborhood of RT #1 [123, 4255] RVT-GII MiaB-like-C Surface_Ag_2 Feature: gene Location: 123-326 bp Feature: gene Location: 497-1810 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 752-1442 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 752-1442 bp Feature: gene Location: 2051-3277 bp Feature: domain Description: MiaB-like-C Location: 2066-3230 bp Feature: domain Description: MiaB-like-C Location: 2066-3230 bp Feature: gene Location: 3323-4255 bp Feature: domain Description: Surface_Ag_2 Location: 3959-4226 bp Feature: domain Description: Surface_Ag_2 Location: 3959-4226 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, MiaB-like-C (TIGR01579), Surface_Ag_2 (pfam01617)

Seq: VCEF01000086.1 (19856 bp)
Overview 1 RT 1: 10331-13714 bp Neighborhood of RT #1 [10331, 13714] pcrA RVT-GII Feature: gene Location: 10331-10759 bp Feature: gene Location: 10887-12803 bp Feature: domain Description: pcrA Location: 10899-12783 bp Feature: domain Description: pcrA Location: 10899-12783 bp Feature: gene Location: 13027-13170 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13030-13165 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13 030-13 165 bp Feature: gene Location: 13333-13554 bp Feature: gene Location: 13580-13714 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT pcrA (TIGR01073), RVT-GII

Seq: VCEF01000082.1 (5223 bp)
Overview 1 RT 1: 111-3611 bp Neighborhood of RT #1 [111, 3646] RVT-GII gatA Feature: gene Location: 111-1424 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 366-1056 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 366-1056 bp Feature: gene Location: 1595-1798 bp Feature: gene Location: 2177-3646 bp Feature: domain Description: gatA Location: 2225-3611 bp Feature: domain Description: gatA Location: 2225-3611 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, gatA (TIGR00132)

Seq: VCEF01000078.1 (10903 bp)
Overview 1 RT 1: 5980-10425 bp Neighborhood of RT #1 [5980, 10793] RVT-GII Feature: gene Location: 5980-8862 bp Feature: gene Location: 9106-9309 bp Feature: gene Location: 9480-10793 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9735-10425 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9735-10425 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII