myRT

myRT report for GCA_005862195.1_ASM586219v1

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Seq: VCEE01000001.1 (3800364 bp)
Overview 1 RT 1: 2688581-2692847 bp 2 RT 2: 3249499-3255627 bp Neighborhood of RT #1 [2688581, 2692852] D PRK09678 RVT-UG11 SmpB PRK10724 Neighborhood of RT #2 [3249499, 3255627] Nuc_deoxyrib_tr RVT-Retrons AAA_15 Feature: gene Location: 2688581-2689681 bp Ori: TLX02562.1 Feature: domain Description: D Location: 2688596-2689667 bp Feature: domain Description: D Location: 2688596-2689667 bp Feature: gene Location: 2689772-2689990 bp Ori: TLX03611.1 Feature: domain Description: PRK09678 Location: 2689775-2689973 bp Feature: domain Description: PRK09678 Location: 2689775-2689973 bp Feature: gene Location: 2690394-2691167 bp Ori: TLX02563.1 Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 2690529-2690982 bp Feature: RT Description: RVT-UG1 1 Note: UG1 1 RT Location: 2690529-2690982 bp Feature: gene Location: 2691783-2692265 bp Ori: TLX02564.1 Gene: smpB Feature: domain Description: SmpB Location: 2691813-2692257 bp Feature: domain Description: SmpB Location: 2691 81 3-2692257 bp Feature: gene Location: 2692376-2692852 bp Ori: TLX02565.1 Feature: domain Description: PRK10724 Location: 2692382-2692847 bp Feature: domain Description: PRK1 0724 Location: 2692382-2692847 bp Feature: gene Location: 3249499-3250368 bp Ori: TLX03023.1 Feature: domain Description: Nuc_deoxyrib_tr Location: 3250021-3250192 bp Feature: domain Description: Nuc_deoxyrib_tr Location: 3250021 -32501 92 bp Feature: gene Location: 3250388-3250543 bp Feature: gene Location: 3251024-3252123 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3251204-3251738 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3251 204-3251 738 bp Feature: gene Location: 3252238-3254484 bp Ori: TLX03024.1 Feature: domain Description: AAA_15 Location: 3252241-3253249 bp Feature: domain Description: AAA_1 5 Location: 3252241 -3253249 bp Feature: gene Location: 3255397-3255627 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT D (PHA02561), PRK09678 (DNA-binding transcriptional regulator; Provisional), RVT-UG11, SmpB (pfam01668), PRK10724 (type II toxin-antitoxin system RatA family toxin), Nuc_deoxyrib_tr (pfam05014), RVT-Retrons, AAA_15 (pfam13175)

Seq: CM016731.1 (302220 bp)
Overview 1 RT 1: 116135-120551 bp Neighborhood of RT #1 [116135, 120565] cas7_csf2 RVT-GII PRK10276 Feature: gene Location: 116135-116926 bp Ori: TLW97218.1 Feature: domain Description: cas7_csf2 Location: 116456-116870 bp Feature: domain Description: cas7_csf2 Location: 116456-116870 bp Feature: gene Location: 118322-118573 bp Feature: gene Location: 118573-120057 bp Ori: TLW97219.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 118975-119665 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 118975-119665 bp Feature: gene Location: 119973-120152 bp Feature: gene Location: 120143-120565 bp Ori: TLW97049.1 Gene: umuD Feature: domain Description: PRK10276 Location: 120149-120551 bp Feature: domain Description: PRK102 76 Location: 12 0149-12 0551 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT cas7_csf2 (TIGR03115), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit)