myRT

myRT report for GCA_005863725.1_ASM586372v1

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Seq: VAVK01000001.1 (230878 bp)
Overview 1 RT 1: 145629-156362 bp 2 RT 2: 172620-181440 bp Neighborhood of RT #1 [145629, 156364] NERD COG3177 RVT_N RVT-GII GIIM HNH PBP2_BvgS_HisK_like PRK09776 PAS PRK10060 PRK05658 Neighborhood of RT #2 [172620, 181469] PRK10770 LptD RVT_N RVT-GII YkfC HNH COG3178 NTP_transferase_like_1 Feature: gene Location: 145629-145844 bp Feature: domain Description: NERD Location: 145656-145779 bp Feature: domain Description: NERD Location: 1 45656-1 45779 bp Feature: gene Location: 146057-147178 bp Feature: domain Description: COG3177 Location: 146075-147167 bp Feature: domain Description: COG31 77 Location: 1 46075-1 471 67 bp Feature: gene Location: 147901-149586 bp Feature: domain Description: RVT_N Location: 147958-148198 bp Feature: domain Description: RVT_N Location: 1 47958-1 481 98 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 148246-148882 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 48246-1 48882 bp Feature: domain Description: GIIM Note: maturase Location: 148936-149167 bp Feature: domain Description: GIIM Note: maturase Location: 1 48936-1 491 67 bp Feature: domain Description: HNH Note: nucleases Location: 149419-149557 bp Feature: domain Description: HNH Note: nucleases Location: 1 4941 9-1 49557 bp Feature: gene Location: 150667-154404 bp Feature: domain Description: PBP2_BvgS_HisK_like Location: 150775-151432 bp Feature: domain Description: PBP2_BvgS_HisK_like Location: 1 50775-1 51 432 bp Feature: domain Description: PRK09776 Location: 151645-152116 bp Feature: domain Description: PRK09776 Location: 1 51 645-1 521 1 6 bp Feature: domain Description: PAS Location: 152173-152698 bp Feature: domain Description: PAS Location: 1 521 73-1 52698 bp Feature: domain Description: PRK10060 Location: 152710-154354 bp Feature: domain Description: PRK1 0060 Location: 1 5271 0-1 54354 bp Feature: gene Location: 154511-156364 bp Feature: domain Description: PRK05658 Location: 154523-156362 bp Feature: domain Description: PRK05658 Location: 1 54523-1 56362 bp Feature: gene Location: 172620-173834 bp Feature: domain Description: PRK10770 Location: 172632-173826 bp Feature: domain Description: PRK1 0770 Location: 1 72632-1 73826 bp Feature: gene Location: 173893-176664 bp Feature: domain Description: LptD Location: 174088-176650 bp Feature: domain Description: LptD Location: 1 74088-1 76650 bp Feature: gene Location: 176797-178509 bp Feature: domain Description: RVT_N Location: 176854-177097 bp Feature: domain Description: RVT_N Location: 1 76854-1 77097 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 177142-177778 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 771 42-1 77778 bp Feature: domain Description: YkfC Location: 177988-178138 bp Feature: domain Description: YkfC Location: 1 77988-1 781 38 bp Feature: domain Description: HNH Note: nucleases Location: 178315-178453 bp Feature: domain Description: HNH Note: nucleases Location: 1 7831 5-1 78453 bp Feature: gene Location: 179782-180798 bp Feature: domain Description: COG3178 Location: 179785-180784 bp Feature: domain Description: COG31 78 Location: 1 79785-1 80784 bp Feature: gene Location: 180795-181469 bp Feature: domain Description: NTP_transferase_like_1 Location: 180801-181440 bp Feature: domain Description: NTP_transferase_like_1 Location: 1 80801 -1 81 440 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: VAVK01000038.1 (43778 bp)
Overview 1 RT 1: 4526-8905 bp Neighborhood of RT #1 [4526, 8905] ABC_phnC DUF772 RVT-GII GIIM Feature: gene Location: 4526-5353 bp Feature: domain Description: ABC_phnC Location: 4556-5270 bp Feature: domain Description: ABC_phnC Location: 4556-52 70 bp Feature: gene Location: 5696-6337 bp Feature: domain Description: DUF772 Location: 5846-6041 bp Feature: domain Description: DUF772 Location: 5846-6041 bp Feature: gene Location: 6726-7994 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6939-7596 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6939-7596 bp Feature: domain Description: GIIM Note: maturase Location: 7674-7896 bp Feature: domain Description: GIIM Note: maturase Location: 7674-7896 bp Feature: gene Location: 8144-8542 bp Feature: gene Location: 8726-8905 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: VAVK01000033.1 (131782 bp)
Overview 1 RT 1: 40171-45752 bp Neighborhood of RT #1 [40171, 45757] SdhE RVT-GII YkfC HNH YgfZ HDOD Feature: gene Location: 40171-40365 bp Feature: gene Location: 40504-40758 bp Feature: domain Description: SdhE Location: 40510-40750 bp Feature: domain Description: SdhE Location: 40510-40750 bp Feature: gene Location: 40834-42153 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 40837-41413 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4083 7-41413 bp Feature: domain Description: YkfC Location: 41611-41767 bp Feature: domain Description: YkfC Location: 41611-41767 bp Feature: domain Description: HNH Note: nucleases Location: 41950-42088 bp Feature: domain Description: HNH Note: nucleases Location: 41950-42088 bp Feature: gene Location: 43876-44820 bp Feature: domain Description: YgfZ Location: 43885-44785 bp Feature: domain Description: YgfZ Location: 43 885-44785 bp Feature: gene Location: 44921-45757 bp Feature: domain Description: HDOD Location: 44924-45752 bp Feature: domain Description: HDOD Location: 44924-45752 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT