myRT

myRT report for GCA_005871095.1_ASM587109v1

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Seq: SWKL01000034.1 (1848 bp)
Overview 1 RT 1: 98-1280 bp Neighborhood of RT #1 [98, 1423] RVT-GII GIIM Feature: gene Location: 98-1423 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 392-1010 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 392-1 01 0 bp Feature: domain Description: GIIM Note: maturase Location: 1058-1280 bp Feature: domain Description: GIIM Note: maturase Location: 1 058-1 280 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: SWKL01000022.1 (673586 bp)
Overview 1 RT 1: 154211-158260 bp Neighborhood of RT #1 [154211, 158298] DUF1566 Avd_like RVT-DGRs Dcm Feature: gene Location: 154211-154576 bp Feature: domain Description: DUF1566 Location: 154241-154565 bp Feature: domain Description: DUF1566 Location: 1542 41-154565 bp Feature: gene Location: 154600-155037 bp Feature: domain Description: Avd_like Location: 154627-154939 bp Feature: domain Description: Avd_like Location: 15462 7-154939 bp Feature: gene Location: 155034-156395 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 155376-156075 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 155376-156075 bp Feature: gene Location: 156404-156553 bp Feature: gene Location: 156574-158298 bp Feature: domain Description: Dcm Location: 156652-158260 bp Feature: domain Description: Dcm Location: 156652 -1582 60 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF1566 (pfam07603), Avd_like (cd16376), RVT-DGRs, Dcm (COG0270)

Seq: SWKL01000019.1 (12260 bp)
Overview 1 RT 1: 2429-10619 bp Neighborhood of RT #1 [2429, 10619] ResIII SF2_C_EcoAI-like 4 RVT-UNC Feature: gene Location: 2429-5275 bp Feature: domain Description: ResIII Location: 2756-3428 bp Feature: domain Description: ResIII Location: 2756-3 428 bp Feature: domain Description: SF2_C_EcoAI-like Location: 4046-4199 bp Feature: domain Description: SF2_C_EcoAI-like Location: 4046-4199 bp Feature: domain Description: 4 Location: 4904-5156 bp Feature: domain Description: 4 Location: 4904-5156 bp Feature: gene Location: 5313-6299 bp Feature: gene Location: 6296-8014 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 6731-7109 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 673 1-7109 bp Feature: gene Location: 8078-8545 bp Feature: gene Location: 8598-10619 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ResIII (pfam04851), SF2_C_EcoAI-like (cd18799), 4 (PHA02552), RVT-UG25/RVT-DGRs/RVT-UG10/RVT-UG17(RVT-UNC)

Seq: SWKL01000014.1 (17140 bp)
Overview 1 RT 1: 58-4690 bp Neighborhood of RT #1 [58, 4707] RVT-UG8 RVT-UG3 PEP-CTERM Feature: gene Location: 58-237 bp Feature: gene Location: 238-2214 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 748-1195 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 74 8-1195 bp Feature: gene Location: 2211-3482 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 2490-3027 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 24 90-3027 bp Feature: gene Location: 3497-3661 bp Feature: gene Location: 3979-4707 bp Feature: domain Description: PEP-CTERM Location: 4624-4690 bp Feature: domain Description: PEP-CTERM Location: 4 624 -4 690 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG8, RVT-UG3, PEP-CTERM

Seq: SWKL01000008.1 (62172 bp)
Overview 1 RT 1: 42434-46151 bp Neighborhood of RT #1 [42434, 46345] RVT-GII GIIM PHA02517 Porin_2 Feature: gene Location: 42434-42679 bp Feature: gene Location: 42705-42854 bp Feature: gene Location: 42851-44374 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 43124-43856 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 43124-4385 6 bp Feature: domain Description: GIIM Note: maturase Location: 43976-44156 bp Feature: domain Description: GIIM Note: maturase Location: 43976-4415 6 bp Feature: gene Location: 44497-44931 bp Feature: domain Description: PHA02517 Location: 44500-44905 bp Feature: domain Description: PHA025 17 Location: 445 00-44905 bp Feature: gene Location: 45095-46345 bp Feature: domain Description: Porin_2 Location: 45272-46151 bp Feature: domain Description: Porin_2 Location: 45 272-4615 1 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed), Porin_2 (pfam02530)