myRT

myRT report for GCA_005879605.1_ASM587960v1

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Seq: VBKE01000438.1 (5657 bp)
Overview 1 RT 1: 1-2821 bp Neighborhood of RT #1 [1, 2847] RVT-GII GIIM TauA Feature: gene Location: 1-791 bp Ori: TMB63862.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 43-550 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 43-550 bp Feature: domain Description: GIIM Note: maturase Location: 628-769 bp Feature: domain Description: GIIM Note: maturase Location: 628-769 bp Feature: gene Location: 996-1175 bp Feature: gene Location: 2323-2847 bp Ori: TMB63864.1 Feature: domain Description: TauA Location: 2332-2821 bp Feature: domain Description: TauA Location: 2332-2821 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), TauA (COG4521)

Seq: VBKE01000130.1 (5061 bp)
Overview 1 RT 1: 1-4863 bp Neighborhood of RT #1 [1, 4863] RVT-GII MmgE_PrpD Feature: gene Location: 1-1275 bp Ori: TMB71256.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 433-1108 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 433-1108 bp Feature: gene Location: 1784-3169 bp Ori: TMB71255.1 Feature: domain Description: MmgE_PrpD Location: 1805-3086 bp Feature: domain Description: MmgE_PrpD Location: 1805-3086 bp Feature: gene Location: 3430-4863 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, MmgE_PrpD (pfam03972)

Seq: VBKE01000513.1 (3256 bp)
Overview 1 RT 1: 157-3256 bp Neighborhood of RT #1 [157, 3256] RVT-UG9 Feature: gene Location: 157-1854 bp Ori: TMB62147.1 Feature: RT Description: RVT-UG9 Note: UG9 RT Location: 391-985 bp Feature: RT Description: RVT-UG9 Note: UG9 RT Location: 3 91-985 bp Feature: gene Location: 2074-3256 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG9

Seq: VBKE01000375.1 (3167 bp)
Overview 1 RT 1: 275-2839 bp Neighborhood of RT #1 [275, 2839] RVT-GII GIIM Feature: gene Location: 275-1855 bp Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 815-1469 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 815-14 69 bp Feature: domain Description: GIIM Note: maturase Location: 1553-1778 bp Feature: domain Description: GIIM Note: maturase Location: 1553-1778 bp Feature: gene Location: 2078-2839 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: VBKE01000393.1 (9654 bp)
Overview 1 RT 1: 1276-8010 bp Neighborhood of RT #1 [1276, 8010] QdoI MR_like RVT-GII GIIM Cyclase Feature: gene Location: 1276-1641 bp Ori: TMB64434.1 Feature: domain Description: QdoI Location: 1312-1612 bp Feature: domain Description: QdoI Location: 1312-1612 bp Feature: gene Location: 2092-3189 bp Ori: TMB64435.1 Feature: domain Description: MR_like Location: 2098-3151 bp Feature: domain Description: MR_like Location: 2098-315 1 bp Feature: gene Location: 3421-4734 bp Ori: TMB64436.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3706-4348 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3706-4348 bp Feature: domain Description: GIIM Note: maturase Location: 4420-4639 bp Feature: domain Description: GIIM Note: maturase Location: 4420-4639 bp Feature: gene Location: 5369-6325 bp Ori: TMB64437.1 Feature: domain Description: Cyclase Location: 5645-6113 bp Feature: domain Description: Cyclase Location: 5 645 -6113 bp Feature: gene Location: 6838-8010 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT QdoI (COG1917), MR_like (cd03316), RVT-GII, GIIM (pfam08388), Cyclase (pfam04199)