myRT

myRT report for GCA_005880255.1_ASM588025v1

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Seq: VBJM01000070.1 (3952 bp)
Overview 1 RT 1: 2-3680 bp Neighborhood of RT #1 [2, 3700] DEDD_Tnp_IS110 Transposase_20 RVT_N RVT-GII GIIM HNH DEDD_Tnp_IS110 Feature: gene Location: 2-892 bp Feature: domain Description: DEDD_Tnp_IS110 Location: 5-89 bp Feature: domain Description: DEDD_Tnp_IS1 1 0 Location: 5-89 bp Feature: domain Description: Transposase_20 Location: 467-719 bp Feature: domain Description: Transposase_20 Location: 467-71 9 bp Feature: gene Location: 970-2799 bp Feature: domain Description: RVT_N Location: 1060-1306 bp Feature: domain Description: RVT_N Location: 1 060-1 306 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1360-2008 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 360-2008 bp Feature: domain Description: GIIM Note: maturase Location: 2116-2344 bp Feature: domain Description: GIIM Note: maturase Location: 21 1 6-2344 bp Feature: domain Description: HNH Note: nucleases Location: 2554-2692 bp Feature: domain Description: HNH Note: nucleases Location: 2554-2692 bp Feature: gene Location: 2853-3068 bp Feature: gene Location: 3371-3700 bp Feature: domain Description: DEDD_Tnp_IS110 Location: 3401-3680 bp Feature: domain Description: DEDD_Tnp_IS1 1 0 Location: 3401 -3680 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: VBJM01000069.1 (7696 bp)
Overview 1 RT 1: 1-4923 bp Neighborhood of RT #1 [1, 5036] UlaG RVT-GII Intron_maturas2 LmbE Feature: gene Location: 1-150 bp Feature: gene Location: 226-888 bp Feature: domain Description: UlaG Location: 229-784 bp Feature: domain Description: UlaG Location: 2 2 9-784 bp Feature: gene Location: 2027-3679 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2207-3017 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 2 07-3017 bp Feature: domain Description: Intron_maturas2 Location: 3113-3422 bp Feature: domain Description: Intron_maturas2 Location: 3113-342 2 bp Feature: gene Location: 3886-4023 bp Feature: gene Location: 4317-5036 bp Feature: domain Description: LmbE Location: 4323-4923 bp Feature: domain Description: LmbE Location: 432 3-492 3 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: VBJM01000122.1 (13954 bp)
Overview 1 RT 1: 2-1342 bp Neighborhood of RT #1 [2, 1935] RVT-GII GIIM HNH McrA Feature: gene Location: 2-496 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 20-392 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 20-3 92 bp Feature: gene Location: 498-1091 bp Feature: domain Description: GIIM Note: maturase Location: 510-645 bp Feature: domain Description: GIIM Note: maturase Location: 510-645 bp Feature: domain Description: HNH Note: nucleases Location: 936-1062 bp Feature: domain Description: HNH Note: nucleases Location: 93 6-1062 bp Feature: gene Location: 1012-1935 bp Feature: domain Description: McrA Location: 1165-1342 bp Feature: domain Description: McrA Location: 1165-13 42 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: VBJM01000573.1 (6719 bp)
Overview 1 RT 1: 3-4471 bp Neighborhood of RT #1 [3, 4482] RVT-GII Intron_maturas2 HNHc RVT-GII Intron_maturas2 HNHc Cyclophil_like2 Feature: gene Location: 3-386 bp Feature: gene Location: 509-2374 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 770-1565 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 770-1565 bp Feature: domain Description: Intron_maturas2 Location: 1694-1931 bp Feature: domain Description: Intron_maturas2 Location: 1694 -1931 bp Feature: domain Description: HNHc Note: nucleases Location: 2105-2285 bp Feature: domain Description: HNHc Note: nucleases Location: 2105-2285 bp Feature: gene Location: 2379-3824 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2463-3051 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 24 63-3051 bp Feature: domain Description: Intron_maturas2 Location: 3150-3447 bp Feature: domain Description: Intron_maturas2 Location: 3150-34 4 7 bp Feature: domain Description: HNHc Note: nucleases Location: 3606-3759 bp Feature: domain Description: HNHc Note: nucleases Location: 3606-3759 bp Feature: gene Location: 3899-4045 bp Feature: gene Location: 4090-4482 bp Feature: domain Description: Cyclophil_like2 Location: 4147-4471 bp Feature: domain Description: Cyclophil_like2 Location: 4 14 7-4 4 71 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: VBJM01000178.1 (4857 bp)
Overview 1 RT 1: 126-4856 bp Neighborhood of RT #1 [126, 4856] RVT-GII group_II_RT_mat HNHc RVT-GII Intron_maturas2 HNHc Feature: gene Location: 126-260 bp Feature: gene Location: 378-2222 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 645-1452 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 645 -145 2 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 1659-1794 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 165 9-1794 bp Feature: domain Description: HNHc Note: nucleases Location: 1992-2169 bp Feature: domain Description: HNHc Note: nucleases Location: 1992-2169 bp Feature: gene Location: 2293-2427 bp Feature: gene Location: 2465-2674 bp Feature: gene Location: 2796-4625 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3057-3852 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 305 7-385 2 bp Feature: domain Description: Intron_maturas2 Location: 3969-4203 bp Feature: domain Description: Intron_maturas2 Location: 3969-4203 bp Feature: domain Description: HNHc Note: nucleases Location: 4374-4560 bp Feature: domain Description: HNHc Note: nucleases Location: 4374-45 60 bp Feature: gene Location: 4719-4856 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT