myRT

myRT report for GCA_005880275.1_ASM588027v1

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Seq: VBHZ01000936.1 (2201 bp)
Overview 1 RT 1: 3-2185 bp Neighborhood of RT #1 [3, 2199] RVT_N RVT-GII YkfC HNHc DEDD_Tnp_IS110 Feature: gene Location: 3-1535 bp Feature: domain Description: RVT_N Location: 9-213 bp Feature: domain Description: RVT_N Location: 9-21 3 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 258-900 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 258-900 bp Feature: domain Description: YkfC Location: 1044-1215 bp Feature: domain Description: YkfC Location: 1 044-1 21 5 bp Feature: domain Description: HNHc Note: nucleases Location: 1410-1536 bp Feature: domain Description: HNHc Note: nucleases Location: 1 41 0-1 536 bp Feature: gene Location: 2041-2199 bp Feature: domain Description: DEDD_Tnp_IS110 Location: 2059-2185 bp Feature: domain Description: DEDD_Tnp_IS1 1 0 Location: 2059-21 85 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, YkfC (COG3344), HNHc (smart00507), DEDD_Tnp_IS110 (pfam01548)

Seq: VBHZ01000599.1 (5833 bp)
Overview 1 RT 1: 800-5720 bp Neighborhood of RT #1 [800, 5720] RVT-GII GIIM HNH RVT-GII RVT-GII Intron_maturas2 HNHc Feature: gene Location: 800-1177 bp Feature: gene Location: 1184-2071 bp Feature: gene Location: 2190-3062 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2214-2343 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 2 14-2 343 bp Feature: domain Description: GIIM Note: maturase Location: 2397-2631 bp Feature: domain Description: GIIM Note: maturase Location: 2 397-2 631 bp Feature: domain Description: HNH Note: nucleases Location: 2883-3021 bp Feature: domain Description: HNH Note: nucleases Location: 2 883-302 1 bp Feature: gene Location: 3720-4406 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3987-4398 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3987-4398 bp Feature: gene Location: 4175-5401 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4436-4631 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4436-4631 bp Feature: domain Description: Intron_maturas2 Location: 4730-5027 bp Feature: domain Description: Intron_maturas2 Location: 4730-502 7 bp Feature: domain Description: HNHc Note: nucleases Location: 5171-5348 bp Feature: domain Description: HNHc Note: nucleases Location: 5171-5348 bp Feature: gene Location: 5472-5720 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), HNH (pfam01844), Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: VBHZ01000314.1 (5137 bp)
Overview 1 RT 1: 2261-4709 bp Neighborhood of RT #1 [2261, 4762] RVT-GII Intron_maturas2 HNHc Feature: gene Location: 2261-2422 bp Feature: gene Location: 2445-2858 bp Feature: gene Location: 2933-4762 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3194-3989 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 194-3 989 bp Feature: domain Description: Intron_maturas2 Location: 4127-4355 bp Feature: domain Description: Intron_maturas2 Location: 4127-43 55 bp Feature: domain Description: HNHc Note: nucleases Location: 4535-4709 bp Feature: domain Description: HNHc Note: nucleases Location: 453 5-4709 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: VBHZ01000644.1 (3544 bp)
Overview 1 RT 1: 257-3135 bp Neighborhood of RT #1 [257, 3135] RVT_N RVT-GII GIIM HNH Feature: gene Location: 257-490 bp Feature: gene Location: 558-713 bp Feature: gene Location: 945-2726 bp Feature: domain Description: RVT_N Location: 987-1233 bp Feature: domain Description: RVT_N Location: 987-1233 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1287-1935 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1287-1935 bp Feature: domain Description: GIIM Note: maturase Location: 2043-2271 bp Feature: domain Description: GIIM Note: maturase Location: 204 3-2271 bp Feature: domain Description: HNH Note: nucleases Location: 2481-2619 bp Feature: domain Description: HNH Note: nucleases Location: 24 81-2619 bp Feature: gene Location: 2711-2944 bp Feature: gene Location: 2980-3135 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNH (pfam01844)

Seq: VBHZ01000783.1 (2744 bp)
Overview 1 RT 1: 2-2685 bp Neighborhood of RT #1 [2, 2741] RVT-GII Intron_maturas2 INT_ICEBs1_C_like Feature: gene Location: 2-1705 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 263-1058 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 263-105 8 bp Feature: domain Description: Intron_maturas2 Location: 1187-1421 bp Feature: domain Description: Intron_maturas2 Location: 1187-1421 bp Feature: gene Location: 1807-2103 bp Feature: gene Location: 2163-2741 bp Feature: domain Description: INT_ICEBs1_C_like Location: 2250-2685 bp Feature: domain Description: INT_ICEBs1_C_like Location: 225 0-2685 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), INT_ICEBs1_C_like (cd01189)