myRT

myRT report for GCA_005883105.1_ASM588310v1

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Seq: VBAA01000309.1 (3579 bp)
Overview 1 RT 1: 84-3146 bp Neighborhood of RT #1 [84, 3577] RVT-GII HTH_29 rve RVT-GII Feature: gene Location: 84-1280 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 528-1218 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 528-1 21 8 bp Feature: gene Location: 1330-2361 bp Feature: domain Description: HTH_29 Location: 1369-1531 bp Feature: domain Description: HTH_29 Location: 1 369-1 531 bp Feature: domain Description: rve Location: 1813-2173 bp Feature: domain Description: rve Location: 1 81 3-21 73 bp Feature: gene Location: 2480-3577 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2483-3146 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2483-31 46 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HTH_29 (pfam13551), rve (pfam00665)

Seq: VBAA01000235.1 (3611 bp)
Overview 1 RT 1: 3-2890 bp Neighborhood of RT #1 [3, 3105] RVT-GII Phage_int_SAM_4 INT_IntI_C Zn_Tnp_IS91 Y2_Tnp Feature: gene Location: 3-425 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 336-423 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 336-42 3 bp Feature: gene Location: 1011-1886 bp Feature: domain Description: Phage_int_SAM_4 Location: 1038-1272 bp Feature: domain Description: Phage_int_SAM_4 Location: 1038-12 72 bp Feature: domain Description: INT_IntI_C Location: 1317-1824 bp Feature: domain Description: INT_IntI_C Location: 1317-182 4 bp Feature: gene Location: 1897-3105 bp Feature: domain Description: Zn_Tnp_IS91 Location: 1930-2203 bp Feature: domain Description: Zn_Tnp_IS91 Location: 1930-2 2 03 bp Feature: domain Description: Y2_Tnp Location: 2329-2890 bp Feature: domain Description: Y2 _Tnp Location: 2 32 9-2 890 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Phage_int_SAM_4 (pfam13495), INT_IntI_C (cd01193), Zn_Tnp_IS91 (pfam14319), Y2_Tnp (pfam04986)

Seq: VBAA01000254.1 (3787 bp)
Overview 1 RT 1: 249-3253 bp Neighborhood of RT #1 [249, 3267] RVT-GII GIIM PhdYeFM_antitox PIN_MT3492-like Feature: gene Location: 249-1577 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 600-1224 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 600-1224 bp Feature: domain Description: GIIM Note: maturase Location: 1266-1479 bp Feature: domain Description: GIIM Note: maturase Location: 1266-1479 bp Feature: gene Location: 2332-2571 bp Feature: domain Description: PhdYeFM_antitox Location: 2335-2539 bp Feature: domain Description: PhdYeFM_antitox Location: 23 3 5-253 9 bp Feature: gene Location: 2881-3267 bp Feature: domain Description: PIN_MT3492-like Location: 2887-3253 bp Feature: domain Description: PIN_MT3 492-like Location: 2887-3 253 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), PhdYeFM_antitox (pfam02604), PIN_MT3492-like (cd09874)

Seq: VBAA01000313.1 (4306 bp)
Overview 1 RT 1: 1-4301 bp Neighborhood of RT #1 [1, 4303] RVT-GII Big_6 Big_6 XkdP GlcG Feature: gene Location: 1-207 bp Feature: gene Location: 211-1743 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 622-1312 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 622-1312 bp Feature: gene Location: 2763-3791 bp Feature: domain Description: Big_6 Location: 2991-3180 bp Feature: domain Description: Big_6 Location: 2991-3180 bp Feature: domain Description: Big_6 Location: 3387-3507 bp Feature: domain Description: Big_6 Location: 3387-3507 bp Feature: domain Description: XkdP Location: 3582-3786 bp Feature: domain Description: XkdP Location: 3582-3786 bp Feature: gene Location: 3812-4303 bp Feature: domain Description: GlcG Location: 3920-4301 bp Feature: domain Description: GlcG Location: 3920-4 301 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Big_6 (pfam17936), XkdP (COG1652), GlcG (COG3193)