myRT

myRT report for GCA_005886135.1_ASM588613v1

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Seq: PNCN01000011.1 (40561 bp)
Overview 1 RT 1: 7132-12683 bp Neighborhood of RT #1 [7132, 12683] HATPase XerC RVT-Retrons HTH_XRE Feature: gene Location: 7132-8121 bp Feature: domain Description: HATPase Location: 7609-7909 bp Feature: domain Description: HATPase Location: 7609-7909 bp Feature: gene Location: 8345-9226 bp Feature: domain Description: XerC Location: 8390-9212 bp Feature: domain Description: XerC Location: 8390-921 2 bp Feature: gene Location: 10058-12019 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 10196-10880 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 01 96-1 0880 bp Feature: gene Location: 12094-12360 bp Feature: domain Description: HTH_XRE Location: 12127-12307 bp Feature: domain Description: HTH_XRE Location: 1 21 27-1 2307 bp Feature: gene Location: 12438-12683 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HATPase (cl00075), XerC (COG4973), RVT-Retrons, HTH_XRE (smart00530)

Seq: PNCN01000118.1 (26045 bp)
Overview 1 RT 1: 5999-10528 bp Neighborhood of RT #1 [5999, 10528] RAYT RVT-GII GIIM Feature: gene Location: 5999-6973 bp Feature: domain Description: RAYT Location: 6140-6593 bp Feature: domain Description: RAYT Location: 6140-6593 bp Feature: gene Location: 7221-7874 bp Feature: gene Location: 8362-9717 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8656-9280 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8656-92 80 bp Feature: domain Description: GIIM Note: maturase Location: 9319-9538 bp Feature: domain Description: GIIM Note: maturase Location: 9319-9538 bp Feature: gene Location: 9786-10088 bp Feature: gene Location: 10115-10528 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RAYT (COG1943), RVT-GII, GIIM (pfam08388)

Seq: PNCN01000092.1 (14762 bp)
Overview 1 RT 1: 4575-9898 bp Neighborhood of RT #1 [4575, 9898] KOG2100 RVT-UG2 couple_hipB Feature: gene Location: 4575-6959 bp Feature: domain Description: KOG2100 Location: 4914-6948 bp Feature: domain Description: KOG2100 Location: 4914-6948 bp Feature: gene Location: 7095-7238 bp Feature: gene Location: 7550-8830 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 7748-8534 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 7748-853 4 bp Feature: gene Location: 8866-9153 bp Feature: domain Description: couple_hipB Location: 8893-9061 bp Feature: domain Description: couple_hipB Location: 8893 -9061 bp Feature: gene Location: 9587-9898 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT KOG2100 (KOG2100, Dipeptidyl aminopeptidase ), RVT-UG2, couple_hipB (TIGR03070)